A novel beta thalassemia gene with a single base mutation in the conserved polypyrimidine sequence at the 3' end of IVS 2
- PMID: 3387213
- PMCID: PMC336707
- DOI: 10.1093/nar/16.11.4927
A novel beta thalassemia gene with a single base mutation in the conserved polypyrimidine sequence at the 3' end of IVS 2
Abstract
An adult Algerian patient with homozygous beta thalassemia was found to have a unique beta thalassemia gene. Cloning and sequencing revealed that the only abnormality present in this beta gene is a transversion in the polypyrimidine stretch at the 3' end of the large intervening sequence (IVS 2) six bases 5' to the consensus AG dinucleotide sequence (CCGCCCACAG instead of CCTCCCACAG). In addition, digestion of the cloned fragment by the enzyme Mnl I demonstrates the disappearance of a restriction site as expected. This is the first example of a defect in the consensus sequence at the 3' end of an IVS leading to a thalassemia phenotype presumably due to decreased splicing.
Similar articles
-
A new beta-thalassemia mutation produced by a single nucleotide substitution in the conserved dinucleotide sequence of the IVS-I consensus acceptor site (AG----AA).Hemoglobin. 1990;14(4):431-40. doi: 10.3109/03630269009032003. Hemoglobin. 1990. PMID: 2283297
-
Five nucleotide changes in the large intervening sequence of a beta globin gene in a beta+ thalassemia patient.Nucleic Acids Res. 1982 Feb 25;10(4):1283-94. doi: 10.1093/nar/10.4.1283. Nucleic Acids Res. 1982. PMID: 6280138 Free PMC article.
-
Beta thalassemia due to a novel mutation in IVS 1 sequence donor site consensus sequence creating a restriction site.Biochem Biophys Res Commun. 1986 Sep 14;139(2):709-13. doi: 10.1016/s0006-291x(86)80048-1. Biochem Biophys Res Commun. 1986. PMID: 3021139
-
Gene defects in beta-thalassemia and their prenatal diagnosis.Ann N Y Acad Sci. 1990;612:1-14. doi: 10.1111/j.1749-6632.1990.tb24285.x. Ann N Y Acad Sci. 1990. PMID: 1705403 Review. No abstract available.
-
Alpha thalassemia.Hemoglobin. 1989;13(7-8):685-731. doi: 10.3109/03630268908998845. Hemoglobin. 1989. PMID: 2699473 Review. No abstract available.
Cited by
-
Defective peroxisome membrane synthesis due to mutations in human PEX3 causes Zellweger syndrome, complementation group G.Am J Hum Genet. 2000 Oct;67(4):967-75. doi: 10.1086/303071. Epub 2000 Aug 24. Am J Hum Genet. 2000. PMID: 10958759 Free PMC article.
-
A T to G mutation in the polypyrimidine tract of the second intron of the human beta-globin gene reduces in vitro splicing efficiency: evidence for an increased hnRNP C interaction.Nucleic Acids Res. 1995 Sep 11;23(17):3419-25. doi: 10.1093/nar/23.17.3419. Nucleic Acids Res. 1995. PMID: 7567451 Free PMC article.
-
Two-exon skipping within MLPH is associated with coat color dilution in rabbits.PLoS One. 2013 Dec 20;8(12):e84525. doi: 10.1371/journal.pone.0084525. eCollection 2013. PLoS One. 2013. PMID: 24376820 Free PMC article.
-
X-linked dyskeratosis congenita is predominantly caused by missense mutations in the DKC1 gene.Am J Hum Genet. 1999 Jul;65(1):50-8. doi: 10.1086/302446. Am J Hum Genet. 1999. PMID: 10364516 Free PMC article.
-
Variable deletion of exon 9 coding sequences in cystic fibrosis transmembrane conductance regulator gene mRNA transcripts in normal bronchial epithelium.EMBO J. 1991 Jun;10(6):1355-63. doi: 10.1002/j.1460-2075.1991.tb07655.x. EMBO J. 1991. PMID: 1709095 Free PMC article.
References
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Medical