Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2021 Apr 29;10(17):e00175-21.
doi: 10.1128/MRA.00175-21.

Complete Genome Sequence of an Antimicrobial-Producing Bacillus velezensis Sam8H1 Isolate from the Makgadikgadi Saltpans of Botswana

Affiliations

Complete Genome Sequence of an Antimicrobial-Producing Bacillus velezensis Sam8H1 Isolate from the Makgadikgadi Saltpans of Botswana

Gorata Modikwe et al. Microbiol Resour Announc. .

Abstract

The global antimicrobial drug resistance crisis requires urgency in searching for more effective broad-spectrum antimicrobial drugs. Here, we present a complete circular genome sequence and a plasmid of an antimicrobial-producing isolate, Bacillus velezensis strain Sam8H1, from the Makgadikgadi saltpans in Botswana. Bioinformatic analyses revealed 12 putative secondary metabolite biosynthetic gene clusters important for genome-guided drug discovery studies.

PubMed Disclaimer

Figures

FIG 1
FIG 1
Antimicrobial activity of the isolate. Zone of inhibition after growth on Luria broth (LB) (A) and activity on Bacillus cereus (B) and B. subtilis (C) when grown on tryptic soy agar (TSA). (D) Activity on E. coli when grown on LB; (E) activity on S. aureus when grown on nutrient agar (NA) supplemented with NaCl; (F) activity on Candida albicans after growth on LB supplemented with NaCl. (G) Concatenated ribosomal protein tree constructed using IQ-TREE. As shown, Bacillus velezensis Sam8H1 is closely related to B. amyloliquefaciens and B. velezensis with very good branch support. Maximum likelihood tree based on the LG+F+I+G4 model with branch support from SH-aLRT and UF-boot.

References

    1. Stokes JL, Woodward CR. 1942. The isolation from soil of spore-forming bacteria which produce bactericidal substances. J Bacteriol 43:253–263. doi:10.1128/JB.43.2.253-263.1942. - DOI - PMC - PubMed
    1. Ruiz-García C, Béjar V, Martínez-Checa F, Llamas I, Quesada E. 2005. Bacillus velezensis sp. nov., a surfactant-producing bacterium isolated from the river Vélez in Málaga, southern Spain. Int J Syst Evol Microbiol 55:191–195. doi:10.1099/ijs.0.63310-0. - DOI - PubMed
    1. Klein TMN. 2015. The isolation and characterisation of novel natural products from marine bacterial symbionts. MSc thesis. University of the Western Cape, Bellville, Republic of South Africa.
    1. Hockett KL, Baltrus DA. 2017. Use of the soft-agar overlay technique to screen for bacterially produced inhibitory compounds. J Vis Exp 119:e55064. doi:10.3791/55064. - DOI - PMC - PubMed
    1. Koren S, Walenz BP, Berlin K, Miller JR, Bergman NH, Phillippy AM. 2017. Canu: scalable and accurate long-read assembly via adaptive k -mer weighting and repeat separation. Genome Res 27:722–736. doi:10.1101/gr.215087.116. - DOI - PMC - PubMed

LinkOut - more resources