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. 2021 May 6;10(18):e00219-21.
doi: 10.1128/MRA.00219-21.

Detection and Genome Sequencing of SARS-CoV-2 Variants Belonging to the B.1.1.7 Lineage in the Philippines

Affiliations

Detection and Genome Sequencing of SARS-CoV-2 Variants Belonging to the B.1.1.7 Lineage in the Philippines

Francis A Tablizo et al. Microbiol Resour Announc. .

Abstract

We report the sequencing and detection of 36 severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) samples containing lineage-defining mutations specific to viruses belonging to the B.1.1.7 lineage in the Philippines.

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References

    1. Kirby T. 2021. New variant of SARS-CoV-2 in UK causes surge of COVID-19. Lancet Respir Med 9:e20–e21. doi:10.1016/S2213-2600(21)00005-9. - DOI - PMC - PubMed
    1. Grabowski F, Preibisch G, Giziński S, Kochanczyk M, Lipniacki T. 2021. SARS-CoV-2 variant of concern 202012/01 has about twofold replicative advantage and acquires concerning mutations. Viruses 13:392. doi:10.3390/v13030392. - DOI - PMC - PubMed
    1. Leung K, Shum MHH, Leung GM, Lam TTY, Wu JT. 2021. Early transmissibility assessment of the N501Y mutant strains of SARS-CoV-2 in the United Kingdom, October to November 2020. Euro Surveill 26:2002106. doi:10.2807/1560-7917.ES.2020.26.1.2002106. - DOI - PMC - PubMed
    1. Li H. 2018. minimap2: pairwise alignment for nucleotide sequences. Bioinformatics 34:3094–3100. doi:10.1093/bioinformatics/bty191. - DOI - PMC - PubMed
    1. Grubaugh N, Gangavarapu K, Quick J, Matteson NL, De Jesus JG, Main BJ, Tan AL, Paul LM, Brackney DE, Grewal S, Gurfield N, Van Rompay KKA, Isern S, Michael SF, Coffey LL, Loman NJ, Andersen KG. 2019. An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar. Genome Biol 20:8. doi:10.1186/s13059-018-1618-7. - DOI - PMC - PubMed

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