Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 1988 Jul 11;16(13):6097-111.
doi: 10.1093/nar/16.13.6097.

Sequence and organization of barley yellow dwarf virus genomic RNA

W A Miller  1 , P M Waterhouse, W L Gerlach
Affiliations
Free PMC article

Sequence and organization of barley yellow dwarf virus genomic RNA

W A Miller et al. Nucleic Acids Res. .
Free PMC article

Abstract

The nucleotide sequence of the genomic RNA of barley yellow dwarf virus, PAV serotype was determined, except for the 5'-terminal base, and its genome organization deduced. The 5,677 nucleotide genome contains five large open reading frames (ORFs). The genes for the coat protein (1) and the putative viral RNA-dependent RNA polymerase were identified. The latter shows a striking degree of similarity to that of carnation mottle virus (CarMV). By comparison with corona- and retrovirus RNAs, it is proposed that a translational frameshift is involved in expression of the polymerase. An ORF encoding an Mr 49,797 protein (50K ORF) may be translated by in-frame readthrough of the coat protein stop codon. The coat protein, an overlapping 17K ORF, and a 3'6.7K ORF are likely to be expressed via subgenomic mRNAs.

PubMed Disclaimer

References

    1. Plasmid. 1985 Jan;13(1):31-40 - PubMed
    1. Cell. 1987 Nov 6;51(3):427-33 - PubMed
    1. J Gen Virol. 1987 Oct;68 ( Pt 10):2563-75 - PubMed
    1. Proc Natl Acad Sci U S A. 1985 Mar;82(6):1618-22 - PubMed
    1. Nucleic Acids Res. 1986 Jun 11;14(11):4673-82 - PubMed

Publication types

Associated data