Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2021 May 27;8(1):142.
doi: 10.1038/s41597-021-00920-z.

Kvasir-Capsule, a video capsule endoscopy dataset

Affiliations

Kvasir-Capsule, a video capsule endoscopy dataset

Pia H Smedsrud et al. Sci Data. .

Abstract

Artificial intelligence (AI) is predicted to have profound effects on the future of video capsule endoscopy (VCE) technology. The potential lies in improving anomaly detection while reducing manual labour. Existing work demonstrates the promising benefits of AI-based computer-assisted diagnosis systems for VCE. They also show great potential for improvements to achieve even better results. Also, medical data is often sparse and unavailable to the research community, and qualified medical personnel rarely have time for the tedious labelling work. We present Kvasir-Capsule, a large VCE dataset collected from examinations at a Norwegian Hospital. Kvasir-Capsule consists of 117 videos which can be used to extract a total of 4,741,504 image frames. We have labelled and medically verified 47,238 frames with a bounding box around findings from 14 different classes. In addition to these labelled images, there are 4,694,266 unlabelled frames included in the dataset. The Kvasir-Capsule dataset can play a valuable role in developing better algorithms in order to reach true potential of VCE technology.

PubMed Disclaimer

Conflict of interest statement

Authors P.H.S., T.J.D.B., H.E., A.P., D.J., T.d.L., M.A.R., and P.H. all own shares in the Augere Medical AS company developing AI solutions for colonoscopies. The Augere video annotation system was used to label the data. There is no commercial interest from Augere regarding this publication and dataset. Otherwise, the authors declare no competing interests.

Figures

Fig. 1
Fig. 1
VCE equipment used for data collection.
Fig. 2
Fig. 2
Image examples of the various labelled classes for images. Images (a) to (c) are from the Anatomy category, and images (d) to (n) are from the Luminal findings category.
Fig. 3
Fig. 3
The number of images in the various Kvasir-Capsule labelled image classes.
Fig. 4
Fig. 4
Samples from the metadata.csv CSV file.
Fig. 5
Fig. 5
Confusion matrices for the best average MCC value which is from the weighted sampling technique. The labeling of the classes is as follows: (A) Angiectasia; (B) Blood - fresh; (C) Erosion; (D) Erythema; (E) Foreign Body; (F) Ileocecal valve; (G) Lymphangiectasia; (H) Normal clean mucosa; (I) Pylorus; (J) Reduced Mucosal View; (K) Ulcer.

Similar articles

Cited by

References

    1. Greenwood-Van Meerveld, B., Johnson, A. C. & Grundy, D. Gastrointestinal physiology and function. In Gastrointestinal Pharmacology, 1–16 (Springer, 2017). - PubMed
    1. McLaughlin PD, Maher MM. Primary malignant diseases of the small intestine. American Journal of Roentgenology. 2013;201:W9–W14. doi: 10.2214/AJR.12.8492. - DOI - PubMed
    1. Thomson A, et al. Small bowel review: diseases of the small intestine. Digestive diseases and sciences. 2001;46:2555–2566. doi: 10.1023/A:1012782321827. - DOI - PubMed
    1. Enns RA, et al. Clinical practice guidelines for the use of video capsule endoscopy. Gastroenterology. 2017;152:497–514. doi: 10.1053/j.gastro.2016.12.032. - DOI - PubMed
    1. Costamagna G, et al. A prospective trial comparing small bowel radiographs and video capsule endoscopy for suspected small bowel disease. Gastroenterology. 2002;123:999–1005. doi: 10.1053/gast.2002.35988. - DOI - PubMed

Publication types

LinkOut - more resources