Plant Lipid Databases
- PMID: 34047992
- DOI: 10.1007/978-1-0716-1362-7_25
Plant Lipid Databases
Abstract
Along with the increase in knowledge on lipid metabolism during the last years, different lipid databases were established in a web-based system. This chapter presents an overview on plant lipid databases for simple and complex lipids focusing on nomenclature, structures as well as physical and chemical properties. Many databases provide information on methods and protocols for lipid isolation, fractionation, and analysis, including lipidomic procedures. References to the lipid literature are included in all databases. Additional data including mass spectra derived from GC-MS, LC-MS, and LC-MS/MS experiments are included in specialized lipid databases. An introduction is presented on how to use the most important lipid databases.
Keywords: Database; Library; Lipidomics; Mass spectrometry; Structures.
References
-
- Liebisch G, Vizcaíno JA, Köfeler H et al (2013) Shorthand notation for lipid structures derived from mass spectrometry. J Lipid Res 54(6):1523–1530. https://doi.org/10.1194/jlr.M033506 - DOI - PubMed - PMC
-
- Fahy E, Subramaniam S, Brown HA et al (2005) A comprehensive classification system for lipids. J Lipid Res 46(5):839–862. https://doi.org/10.1194/jlr.E400004-JLR200 - DOI - PubMed
-
- Ohlrogge J, Thrower N, Mhaske V et al (2018) PlantFAdb: a resource for exploring hundreds of plant fatty acid structures synthesized by thousands of plants and their phylogenetic relationships. Plant J 96(6):1299–1308. https://doi.org/10.1111/tpj.14102 - DOI - PubMed
-
- Matthäus B (2012) The new database Seed Oil Fatty Acids (SOFA). Lipid Technol 24(10):230–234. https://doi.org/10.1002/lite.201200227 - DOI
-
- Aitzetmüller K, Matthäus B, Friedrich H (2003) A new database for seed oil fatty acids—the database SOFA. Eur J Lipid Sci Technol 105(2):92–103. https://doi.org/10.1002/ejlt.200390022 - DOI
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Miscellaneous
