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. 2021 Jun 8;82(7):67.
doi: 10.1007/s00285-021-01620-3.

Stationary distributions via decomposition of stochastic reaction networks

Affiliations

Stationary distributions via decomposition of stochastic reaction networks

Linard Hoessly. J Math Biol. .

Abstract

We examine reaction networks (CRNs) through their associated continuous-time Markov processes. Studying the dynamics of such networks is in general hard, both analytically and by simulation. In particular, stationary distributions of stochastic reaction networks are only known in some cases. We analyze class properties of the underlying continuous-time Markov chain of CRNs under the operation of join and examine conditions such that the form of the stationary distributions of a CRN is derived from the parts of the decomposed CRNs. The conditions can be easily checked in examples and allow recursive application. The theory developed enables sequential decomposition of the Markov processes and calculations of stationary distributions. Since the class of processes expressible through such networks is big and only few assumptions are made, the principle also applies to other stochastic models. We give examples of interest from CRN theory to highlight the decomposition.

Keywords: Continuous-time Markov process; Markov process; Stochastic reaction networks; mass-action system; product-form stationary distributions.

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References

    1. Anderson D, Kim J. Some network conditions for positive recurrence of stochastically modeled reaction networks. SIAM J Appl Math. 2018;78(5):2692–2713. doi: 10.1137/17M1161427. - DOI
    1. Anderson D, Craciun G, Kurtz T (2010) Product-form stationary distributions for deficiency zero chemical reaction networks. Bul Math Biol 72:1947–1970 - PubMed
    1. Anderson D, Kim J, Cappelletti D, Nguyen T. Tier structure of strongly endotactic reaction networks. Stochastic Process Appl. 2020;130(12):7218–7259. doi: 10.1016/j.spa.2020.07.012. - DOI
    1. Anderson D, Koyama M, Cappelletti D, Kurtz T. Non-explosivity of stochastically modeled reaction networks that are complex balanced. Bull Math Biol. 2018;80(10):2561–2579. doi: 10.1007/s11538-018-0473-8. - DOI - PubMed
    1. Anderson D, Nguyen T. Results on stochastic reaction networks with non-mass action kinetics. Mathemat Biosci Eng. 2019 doi: 10.3934/mbe.2019103. - DOI - PubMed

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