Potential roles of super enhancers in inflammatory gene transcription
- PMID: 34173323
- DOI: 10.1111/febs.16089
Potential roles of super enhancers in inflammatory gene transcription
Abstract
Acute and chronic inflammation is a basic pathological event that contributes to atherosclerosis, cancer, infectious diseases, and immune disorders. Inflammation is an adaptive process to both external and internal stimuli experienced by the human body. Although the mechanism of gene transcription is highly complicated and orchestrated in a timely and spatial manner, recent developments in next-generation sequencing, genome-editing, cryo-electron microscopy, and single cell-based technologies could provide us with insights into the roles of super enhancers (SEs). Initially, SEs were implicated in determining cell fate; subsequent studies have clarified that SEs are associated with various pathological conditions, including cancer and inflammatory diseases. Recent technological advances have unveiled the molecular mechanisms of SEs, which involve epigenetic histone modifications, chromatin three-dimensional structures, and phase-separated condensates. In this review, we discuss the relationship between inflammation and SEs and the therapeutic potential of SEs for inflammatory diseases.
Keywords: inflammation; inflammatory gene transcription; super enhancer.
© 2021 Federation of European Biochemical Societies.
References
-
- Tippens ND, Vihervaara A & Lis JT (2018) Enhancer transcription: what, where, when, and why? Genes Dev 32, 1-3.
-
- ENCODE Project Consortium, Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A et al. (2020) Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature 583, 699-710.
-
- Thurman RE, Rynes E, Humbert R, Vierstra J, Maurano MT, Haugen E, Sheffield NC, Stergachis AB, Wang H, Vernot B et al. (2012) The accessible chromatin landscape of the human genome. Nature 489, 75-82.
-
- Narita T, Ito S, Higashijima Y, Chu WK, Neumann K, Walter J, Satpathy S, Liebner T, Hamilton WB, Maskey E et al. (2021) Enhancers are activated by p300/CBP activity-dependent PIC assembly, RNAPII recruitment, and pause release. Mol Cell 81, 2166-2182.e6.
-
- Larke MSC, Schwessinger R, Nojima T, Telenius J, Beagrie RA, Downes DJ, Oudelaar AM, Truch J, Graham B, Bender MA et al. (2021) Enhancers predominantly regulate gene expression during differentiation via transcription initiation. Mol Cell 81, 983-997.e7.
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