Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2022 Oct;289(19):5875-5890.
doi: 10.1111/febs.16168. Epub 2021 Sep 3.

The Enzyme Portal: an integrative tool for enzyme information and analysis

Affiliations
Free article
Review

The Enzyme Portal: an integrative tool for enzyme information and analysis

Rossana Zaru et al. FEBS J. 2022 Oct.
Free article

Abstract

Enzymes play essential roles in all life processes and are used extensively in the biomedical and biotechnological fields. However, enzyme-related information is spread across multiple resources making its retrieval time-consuming. In response to this challenge, the Enzyme Portal has been established to facilitate enzyme research, by providing a freely available hub where researchers can easily find and explore enzyme-related information. It integrates relevant enzyme data for a wide range of species from various resources such as UniProtKB, PDBe and ChEMBL. Here, we describe what type of enzyme-related data the Enzyme Portal provides, how the information is organized and, by show-casing two potential use cases, how to access and retrieve it.

Keywords: EC number; database; enzyme; metabolite.

PubMed Disclaimer

References

    1. Bateman A, Martin MJ, Orchard S, Magrane M, Agivetova R, Ahmad S, Alpi E, Bowler-Barnett EH, Britto R, Bursteinas B et al. (2021) UniProt: The universal protein knowledgebase in 2021. Nucleic Acids Res 49, D480-D489.
    1. Crow YJ, Hayward BE, Parmar R, Robins P, Leitch A, Ali M, Black DN, Van Bokhoven H, Brunner HG, Hamel BC et al. (2006) Mutations in the gene encoding the 3′-5′ DNA exonuclease TREX1 cause Aicardi-Goutières syndrome at the AGS1 locus. Nat Genet 38, 917-920.
    1. Lee-Kirsch MA, Gong M, Chowdhury D, Senenko L, Engel K, Lee YA, De Silva U, Bailey SL, Witte T, Vyse TJ et al. (2007) Mutations in the gene encoding the 3′-5′ DNA exonuclease TREX1 are associated with systemic lupus erythematosus. Nat Genet 39, 1065-1067.
    1. Urbaniak MD, Mathieson T, Bantscheff M, Eberhard D, Grimaldi R, Miranda-Saavedra D, Wyatt P, Ferguson MAJ, Frearson J & Drewes G (2012) Chemical proteomic analysis reveals the drugability of the kinome of trypanosoma brucei. ACS Chem Biol 7, 1858-1865.
    1. Knott GJ & Doudna JA (2018) CRISPR-Cas guides the future of genetic engineering. Science (80-) 361, 866-869.

LinkOut - more resources