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Review
. 2021 Aug 26:15:682063.
doi: 10.3389/fnins.2021.682063. eCollection 2021.

Compressed Sensing of Extracellular Neurophysiology Signals: A Review

Affiliations
Review

Compressed Sensing of Extracellular Neurophysiology Signals: A Review

Biao Sun et al. Front Neurosci. .

Abstract

This article presents a comprehensive survey of literature on the compressed sensing (CS) of neurophysiology signals. CS is a promising technique to achieve high-fidelity, low-rate, and hardware-efficient neural signal compression tasks for wireless streaming of massively parallel neural recording channels in next-generation neural interface technologies. The main objective is to provide a timely retrospective on applying the CS theory to the extracellular brain signals in the past decade. We will present a comprehensive review on the CS-based neural recording system architecture, the CS encoder hardware exploration and implementation, the sparse representation of neural signals, and the signal reconstruction algorithms. Deep learning-based CS methods are also discussed and compared with the traditional CS-based approaches. We will also extend our discussion to cover the technical challenges and prospects in this emerging field.

Keywords: compressed sensing; electrophysiology; sparse recovery; sparse representation (coding); wireless neural recording.

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Conflict of interest statement

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Figures

Figure 1
Figure 1
Compressed sensing based neural recording architecture and signal processing flow.

References

    1. Aharon M., Elad M., Bruckstein A. (2006). K-SVD: an algorithm for designing overcomplete dictionaries for sparse representation. IEEE Trans. Signal Process. 54, 4311–4322. 10.1109/TSP.2006.881199 - DOI
    1. Allen W. E., Chen M. Z., Pichamoorthy N., Tien R. H., Pachitariu M., Luo L., et al. . (2019). Thirst regulates motivated behavior through modulation of brainwide neural population dynamics. Science 364:eaav3932. 10.1126/science.aav3932 - DOI - PMC - PubMed
    1. Andersen R. A., Musallam S., Pesaran B. (2004). Selecting the signals for a brain-machine interface. Curr. Opin. Neurobiol. 14, 720–726. 10.1016/j.conb.2004.10.005 - DOI - PubMed
    1. Becker S., Bobin J., Candés E. J. (2011). Nesta: A fast and accurate first-order method for sparse recovery. SIAM J. Imaging Sci. 4, 1–39. 10.1137/090756855 - DOI
    1. Berényi A., Somogyvári Z., Nagy A. J., Roux L., Long J. D., Fujisawa S., et al. . (2014). Large-scale, high-density (up to 512 channels) recording of local circuits in behaving animals. J. Neurophysiol. 111, 1132–1149. 10.1152/jn.00785.2013 - DOI - PMC - PubMed