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Editorial
. 2021 Oct 22;18(3):20210026.
doi: 10.1515/jib-2021-0026.

Specifications of standards in systems and synthetic biology: status and developments in 2021

Falk Schreiber  1   2 , Padraig Gleeson  3 , Martin Golebiewski  4 , Thomas E Gorochowski  5 , Michael Hucka  6 , Sarah M Keating  3 , Matthias König  7 , Chris J Myers  8 , David P Nickerson  9 , Björn Sommer  10 , Dagmar Waltemath  11
Affiliations
Editorial

Specifications of standards in systems and synthetic biology: status and developments in 2021

Falk Schreiber et al. J Integr Bioinform. .

Abstract

This special issue of the Journal of Integrative Bioinformatics contains updated specifications of COMBINE standards in systems and synthetic biology. The 2021 special issue presents four updates of standards: Synthetic Biology Open Language Visual Version 2.3, Synthetic Biology Open Language Visual Version 3.0, Simulation Experiment Description Markup Language Level 1 Version 4, and OMEX Metadata specification Version 1.2. This document can also be consulted to identify the latest specifications of all COMBINE standards.

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Figures

Figure 1:
Figure 1:
COMBINE standards and associated efforts (updated from [3]).
See this image and copyright information in PMC

References

    1. Waltemath D, Golebiewski M, Blinov ML, Gleeson P, Hermjakob H, Hucka M, et al. . The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE). J Integr Bioinform 2020;17:5. 10.1515/jib-2020-0005. - DOI - PMC - PubMed
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    1. Schreiber F, Bader GD, Gleeson P, Golebiewski M, Hucka M, Keating SM, et al. . Specifications of standards in systems and synthetic biology: status and developments in 2018. J Integr Bioinform 2018;15:13. 10.1515/jib-2018-0013. - DOI - PMC - PubMed
    1. Schreiber F, Bader GD, Golebiewski M, Hucka M, Kormeier B, Le Novère N, et al. . Specifications of standards in systems and synthetic biology. J Integr Bioinform 2015;12:258. 10.2390/biecoll-jib-2015-258. - DOI - PMC - PubMed
    1. Schreiber F, Bader GD, Gleeson P, Golebiewski M, Hucka M, Novère NL, et al. . Specifications of standards in systems and synthetic biology: status and developments in 2016. J Integr Bioinform 2016;13:289. 10.2390/biecoll-jib-2016-289. - DOI - PMC - PubMed

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