MicroRNA482/2118, a miRNA superfamily essential for both disease resistance and plant development
- PMID: 34761409
- DOI: 10.1111/nph.17853
MicroRNA482/2118, a miRNA superfamily essential for both disease resistance and plant development
Abstract
MicroRNAs (miRNAs) are a class of 21-24 nucleotides (nt) noncoding small RNAs ubiquitously distributed across the plant kingdom. miR482/2118, one of the conserved miRNA superfamilies originating from gymnosperms, has divergent main functions in core-angiosperms. It mainly regulates NUCLEOTIDE BINDING SITE-LEUCINE-RICH REPEAT (NBS-LRR) genes in eudicots, functioning as an essential component in plant disease resistance; in contrast, it predominantly targets numerous long noncoding RNAs (lncRNAs) in monocot grasses, which are vital for plant reproduction. Usually, miR482/2118 is 22-nt in length, which can trigger the production of phased small interfering RNAs (phasiRNAs) after directed cleavage. PhasiRNAs instigated from target genes of miR482/2118 enhance their roles in corresponding biological processes by cis-regulation on cognate genes and expands their function to other pathways via trans activity on different genes. This review summarizes the origin, biogenesis, conservation, and evolutionary characteristics of the miR482/2118 superfamily and delineates its diverse functions in disease resistance, plant development, stress responses, etc.
Keywords: NBS-LRR; disease resistance; evolution; function divergence; genic male sterility; miR482/2118 superfamily; phasiRNAs; reproduction.
© 2021 The Authors. New Phytologist © 2021 New Phytologist Foundation.
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References
-
- Allen E, Xie Z, Gustafson AM, Carrington JC. 2005. microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 121: 207-221.
-
- Altuvia Y, Landgraf P, Lithwick G, Elefant N, Pfeffer S, Aravin A, Brownstein MJ, Tuschl T, Margalit H. 2005. Clustering and conservation patterns of human microRNAs. Nucleic Acids Research 33: 2697-2706.
-
- Araki S, Le NT, Koizumi K, Villar-Briones A, Nonomura KI, Endo M, Inoue H, Saze H, Komiya R. 2020. miR2118-dependent U-rich phasiRNA production in rice anther wall development. Nature Communications 11: 3115.
-
- Baldrich P, Beric A, Meyers BC. 2018. Despacito: the slow evolutionary changes in plant microRNAs. Current Opinion in Plant Biology 42: 16-22.
-
- Boccara M, Sarazin A, Thiébeauld O, Jay F, Voinnet O, Navarro L, Colot V. 2014. The Arabidopsis miR472-RDR6 silencing pathway modulates PAMP- and effector-triggered immunity through the post-transcriptional control of disease resistance genes. PLoS Pathogens 10: e1003883.
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