Published Erratum
doi: 10.1038/s41592-021-01368-0.
Author Correction: Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis
Rebeca Kawahara
1
, Anastasia Chernykh
1
, Kathirvel Alagesan
2
, Marshall Bern
3
, Weiqian Cao
4
, Robert J Chalkley
5
, Kai Cheng
6
, Matthew S Choo
7
, Nathan Edwards
8
9
, Radoslav Goldman
8
9
10
, Marcus Hoffmann
11
, Yingwei Hu
12
, Yifan Huang
13
, Jin Young Kim
14
, Doron Kletter
3
, Benoit Liquet
15
16
, Mingqi Liu
4
, Yehia Mechref
13
, Bo Meng
17
, Sriram Neelamegham
6
, Terry Nguyen-Khuong
7
, Jonas Nilsson
18
, Adam Pap
19
20
, Gun Wook Park
14
, Benjamin L Parker
21
, Cassandra L Pegg
22
, Josef M Penninger
23
24
, Toan K Phung
22
, Markus Pioch
11
, Erdmann Rapp
11
25
, Enes Sakalli
23
, Miloslav Sanda
8
10
, Benjamin L Schulz
22
, Nichollas E Scott
26
, Georgy Sofronov
15
, Johannes Stadlmann
23
, Sergey Y Vakhrushev
27
, Christina M Woo
28
, Hung-Yi Wu
28
, Pengyuan Yang
4
, Wantao Ying
17
, Hui Zhang
12
, Yong Zhang
17
, Jingfu Zhao
13
, Joseph Zaia
29
, Stuart M Haslam
30
, Giuseppe Palmisano
31
, Jong Shin Yoo
14
32
, Göran Larson
33
, Kai-Hooi Khoo
34
, Katalin F Medzihradszky
5
19
, Daniel Kolarich
2
, Nicolle H Packer
1
2
35
, Morten Thaysen-Andersen
36
37
Affiliations
Affiliations
- 1 Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia.
- 2 Institute for Glycomics, Griffith University Gold Coast Campus, Southport, QLD, Australia.
- 3 Protein Metrics Inc., Cupertino, CA, USA.
- 4 Institutes of Biomedical Sciences, and the NHC Key Laboratory of Glycoconjugates Research, Fudan University, Shanghai, China.
- 5 UCSF, School of Pharmacy, Department of Pharmaceutical Chemistry, San Francisco, CA, USA.
- 6 State University of New York, Buffalo, NY, USA.
- 7 Analytics Group, Bioprocessing Technology Institute, Agency for Science, Technology and Research, Singapore, Singapore.
- 8 Clinical and Translational Glycoscience Research Center (CTGRC), Georgetown University, Washington, DC, USA.
- 9 Department of Biochemistry and Molecular & Cellular Biology, Georgetown University, Washington, DC, USA.
- 10 Department of Oncology, Georgetown University, Washington, DC, USA.
- 11 Max Planck Institute for Dynamics of Complex Technical Systems, Bioprocess Engineering, Magdeburg, Germany.
- 12 Department of Pathology, The Johns Hopkins University, Baltimore, MD, USA.
- 13 Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, USA.
- 14 Research Center of Bioconvergence Analysis, Korea Basic Science Institute, Daejeon, Republic of Korea.
- 15 Department of Mathematics and Statistics, Macquarie University, Sydney, NSW, Australia.
- 16 CNRS, Laboratoire de Mathématiques et de leurs Applications de PAU, E2S-UPPA, Pau, France.
- 17 State Key Laboratory of Proteomics, Beijing Institute of Lifeomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing, China.
- 18 Proteomics Core Facility, Sahlgrenska academy, University of Gothenburg, Gothenburg, Sweden.
- 19 BRC, Laboratory of Proteomics Research, Szeged, Hungary.
- 20 Doctoral School in Biology, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary.
- 21 Department of Anatomy and Physiology, University of Melbourne, Melbourne, VIC, Australia.
- 22 School of Chemistry and Molecular Biosciences, University of Queensland, Queensland, QLD, Australia.
- 23 IMBA, Institute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna, Austria.
- 24 Department of Medical Genetics, Life Sciences Institute, University of British Columbia, Vancouver, BC, Canada.
- 25 glyXera GmbH, Magdeburg, Germany.
- 26 Deparment of Microbiology and Immunology, University of Melbourne, Melbourne, VIC, Australia.
- 27 Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark.
- 28 Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.
- 29 Department of Biochemistry, Boston University Medical Campus, Boston, MA, USA.
- 30 Department of Life Sciences, Imperial College London, London, UK.
- 31 Instituto de Ciências Biomédicas, Departamento de Parasitologia, Universidade de São Paulo, São Paulo, SP, Brazil.
- 32 Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon, Republic of Korea.
- 33 Department of Laboratory Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
- 34 Institute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
- 35 Biomolecular Discovery Research Centre, Macquarie University, Sydney, NSW, Australia.
- 36 Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia. morten.andersen@mq.edu.au.
- 37 Biomolecular Discovery Research Centre, Macquarie University, Sydney, NSW, Australia. morten.andersen@mq.edu.au.
- PMID: 34893784
- PMCID: PMC8748192
- DOI: 10.1038/s41592-021-01368-0
Item in Clipboard
Published Erratum
Author Correction: Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis
Rebeca Kawahara et al.
Nat Methods.
2022 Jan.
Display options
Format
doi: 10.1038/s41592-021-01368-0.
Authors
Rebeca Kawahara
1
, Anastasia Chernykh
1
, Kathirvel Alagesan
2
, Marshall Bern
3
, Weiqian Cao
4
, Robert J Chalkley
5
, Kai Cheng
6
, Matthew S Choo
7
, Nathan Edwards
8
9
, Radoslav Goldman
8
9
10
, Marcus Hoffmann
11
, Yingwei Hu
12
, Yifan Huang
13
, Jin Young Kim
14
, Doron Kletter
3
, Benoit Liquet
15
16
, Mingqi Liu
4
, Yehia Mechref
13
, Bo Meng
17
, Sriram Neelamegham
6
, Terry Nguyen-Khuong
7
, Jonas Nilsson
18
, Adam Pap
19
20
, Gun Wook Park
14
, Benjamin L Parker
21
, Cassandra L Pegg
22
, Josef M Penninger
23
24
, Toan K Phung
22
, Markus Pioch
11
, Erdmann Rapp
11
25
, Enes Sakalli
23
, Miloslav Sanda
8
10
, Benjamin L Schulz
22
, Nichollas E Scott
26
, Georgy Sofronov
15
, Johannes Stadlmann
23
, Sergey Y Vakhrushev
27
, Christina M Woo
28
, Hung-Yi Wu
28
, Pengyuan Yang
4
, Wantao Ying
17
, Hui Zhang
12
, Yong Zhang
17
, Jingfu Zhao
13
, Joseph Zaia
29
, Stuart M Haslam
30
, Giuseppe Palmisano
31
, Jong Shin Yoo
14
32
, Göran Larson
33
, Kai-Hooi Khoo
34
, Katalin F Medzihradszky
5
19
, Daniel Kolarich
2
, Nicolle H Packer
1
2
35
, Morten Thaysen-Andersen
36
37
Affiliations
- 1 Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia.
- 2 Institute for Glycomics, Griffith University Gold Coast Campus, Southport, QLD, Australia.
- 3 Protein Metrics Inc., Cupertino, CA, USA.
- 4 Institutes of Biomedical Sciences, and the NHC Key Laboratory of Glycoconjugates Research, Fudan University, Shanghai, China.
- 5 UCSF, School of Pharmacy, Department of Pharmaceutical Chemistry, San Francisco, CA, USA.
- 6 State University of New York, Buffalo, NY, USA.
- 7 Analytics Group, Bioprocessing Technology Institute, Agency for Science, Technology and Research, Singapore, Singapore.
- 8 Clinical and Translational Glycoscience Research Center (CTGRC), Georgetown University, Washington, DC, USA.
- 9 Department of Biochemistry and Molecular & Cellular Biology, Georgetown University, Washington, DC, USA.
- 10 Department of Oncology, Georgetown University, Washington, DC, USA.
- 11 Max Planck Institute for Dynamics of Complex Technical Systems, Bioprocess Engineering, Magdeburg, Germany.
- 12 Department of Pathology, The Johns Hopkins University, Baltimore, MD, USA.
- 13 Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, USA.
- 14 Research Center of Bioconvergence Analysis, Korea Basic Science Institute, Daejeon, Republic of Korea.
- 15 Department of Mathematics and Statistics, Macquarie University, Sydney, NSW, Australia.
- 16 CNRS, Laboratoire de Mathématiques et de leurs Applications de PAU, E2S-UPPA, Pau, France.
- 17 State Key Laboratory of Proteomics, Beijing Institute of Lifeomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing, China.
- 18 Proteomics Core Facility, Sahlgrenska academy, University of Gothenburg, Gothenburg, Sweden.
- 19 BRC, Laboratory of Proteomics Research, Szeged, Hungary.
- 20 Doctoral School in Biology, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary.
- 21 Department of Anatomy and Physiology, University of Melbourne, Melbourne, VIC, Australia.
- 22 School of Chemistry and Molecular Biosciences, University of Queensland, Queensland, QLD, Australia.
- 23 IMBA, Institute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna, Austria.
- 24 Department of Medical Genetics, Life Sciences Institute, University of British Columbia, Vancouver, BC, Canada.
- 25 glyXera GmbH, Magdeburg, Germany.
- 26 Deparment of Microbiology and Immunology, University of Melbourne, Melbourne, VIC, Australia.
- 27 Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark.
- 28 Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.
- 29 Department of Biochemistry, Boston University Medical Campus, Boston, MA, USA.
- 30 Department of Life Sciences, Imperial College London, London, UK.
- 31 Instituto de Ciências Biomédicas, Departamento de Parasitologia, Universidade de São Paulo, São Paulo, SP, Brazil.
- 32 Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon, Republic of Korea.
- 33 Department of Laboratory Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
- 34 Institute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
- 35 Biomolecular Discovery Research Centre, Macquarie University, Sydney, NSW, Australia.
- 36 Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia. morten.andersen@mq.edu.au.
- 37 Biomolecular Discovery Research Centre, Macquarie University, Sydney, NSW, Australia. morten.andersen@mq.edu.au.
- PMID: 34893784
- PMCID: PMC8748192
- DOI: 10.1038/s41592-021-01368-0
Item in Clipboard
Display options
Format
No abstract available
Erratum for
-
Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis.Kawahara R, Chernykh A, Alagesan K, Bern M, Cao W, Chalkley RJ, Cheng K, Choo MS, Edwards N, Goldman R, Hoffmann M, Hu Y, Huang Y, Kim JY, Kletter D, Liquet B, Liu M, Mechref Y, Meng B, Neelamegham S, Nguyen-Khuong T, Nilsson J, Pap A, Park GW, Parker BL, Pegg CL, Penninger JM, Phung TK, Pioch M, Rapp E, Sakalli E, Sanda M, Schulz BL, Scott NE, Sofronov G, Stadlmann J, Vakhrushev SY, Woo CM, Wu HY, Yang P, Ying W, Zhang H, Zhang Y, Zhao J, Zaia J, Haslam SM, Palmisano G, Yoo JS, Larson G, Khoo KH, Medzihradszky KF, Kolarich D, Packer NH, Thaysen-Andersen M. Kawahara R, et al. Nat Methods. 2021 Nov;18(11):1304-1316. doi: 10.1038/s41592-021-01309-x. Epub 2021 Nov 1. Nat Methods. 2021. PMID: 34725484 Free PMC article.
Publication types
LinkOut - more resources
Full Text Sources
