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Editorial
. 2021 Nov 26:12:795098.
doi: 10.3389/fmicb.2021.795098. eCollection 2021.

Editorial: Integrating Whole Genome Sequencing Into Source Attribution and Risk Assessment of Foodborne Bacterial Pathogens

Frederique Pasquali  1 , Daniel Remondini  2 , Emma Louise Snary  3 , Tine Hald  4 , Laurent Guillier  5
Affiliations
Editorial

Editorial: Integrating Whole Genome Sequencing Into Source Attribution and Risk Assessment of Foodborne Bacterial Pathogens

Frederique Pasquali et al. Front Microbiol. .
No abstract available

Keywords: foodborne pathogens; metagenomics; microbial risk assessment; source attribution; whole genome sequencing.

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Conflict of interest statement

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Comment on

  • Editorial on the Research Topic Integrating Whole Genome Sequencing Into Source Attribution and Risk Assessment of Foodborne Bacterial Pathogens

References

    1. Barco L., Barrucci F., Olsen J. E., Ricci A. (2013). Salmonella source attribution based on microbial subtyping. Int. J. Food Microbiol. 163, 193–203. 10.1016/j.ijfoodmicro.2013.03.005 - DOI - PubMed
    1. Cassini A., Hathaway S., Havelaar A., Koopmans M., Koutsoumanis K., Messens W., et al. . (2016). Special issue: microbiological risk assessment. EFSA J. 14:s0507. 10.2903/j.efsa.2016.s0507 - DOI
    1. Cody A. J., Maiden M. C., Strachan N. J., McCarthy N. D. (2019). A systematic review of source attribution of human campylobacteriosis using multilocus sequence typing. Euro Surveill. 24:1800696. 10.2807/1560-7917.ES.2019.24.43.1800696 - DOI - PMC - PubMed
    1. EFSA Panel on Biological Hazards. Koutsoumanis K., Allende A., Alvarez-Ordonez A., Bolton D., Bover-Cid S., et al. . (2019). Scientific opinion on the whole genome sequencing and metagenomics for outbreak investigation, source attribution and risk assessment of food-borne microorganisms. EFSA J. 17:5898. 10.2903/j.efsa.2019.5898 - DOI - PMC - PubMed
    1. FAO and WHO (2021). Microbiological risk assessment - Guidance for food. Rome: Guidance. Microbiological Risk Assessment Series No. 36.

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