Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 1998 Mar;14(1):105-116.
doi: 10.1111/j.1096-0031.1998.tb00206.x.

PTP is Meaningless, T-PTP is Contradictory: A Reply to Trueman

Affiliations
Free article

PTP is Meaningless, T-PTP is Contradictory: A Reply to Trueman

James M Carpenter et al. Cladistics. 1998 Mar.
Free article

Abstract

- The T-PTP test for monophyly can attribute significance to entirely unsupported groups and even to both of two contradictory alternatives. The method of evaluating "support" after replacing selected groups of terminals with reconstructed ancestors has similar drawbacks. The proposed placement of Onychophora among Arthropoda is unsupported by 12S data, and strongly refuted by other evidence. Attempts to justify T-PTP on Popperian grounds rest entirely on misunderstanding Popper's ideas. The PTP test assesses neither Popperian corroboration nor statistical confidence of phylogenetic conclusions. It can attribute high significance to data that support no resolved grouping. Efforts to salvage PTP by proposing new interpretations share the weakness that none of the proposed interpretations generally holds. None of these methods seems useful in phylogenetic.

PubMed Disclaimer

References

REFERENCES

    1. Archie, J. W. (1989). A randomization test for phylogenetic information in systematic data. Syst. Zool., 38, 219-252.
    1. Ballard, J. W. O., Olsen, G. J., Faith, D. P., Odgers, W. A., Rowell, D. M., and Atkinson, P. W. (1992). Evidence from 12S ribosomal RNA sequences that onychophorans are modified arthropods. Science, 258, 1345-1348.
    1. Bremer, K. (1988). The limits of amino-acid sequence data in angiosperm phylogenetic reconstruction. Evolution, 42, 795-803.
    1. Bremer, K. (1994). Branch support and tree stability. Cladistics, 8, 295-304.
    1. Bull, J. J., Huelsenbeck, J. P., Cunningham, C. W., Swofford, D. L., and Waddell, P. J. (1993). Partitioning and combining data in phylogenetic analysis. Syst. Biol., 42, 384-397.

LinkOut - more resources