Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2022:2433:303-323.
doi: 10.1007/978-1-0716-1998-8_19.

Cell-Free Biosensors and AI Integration

Affiliations

Cell-Free Biosensors and AI Integration

Paul Soudier et al. Methods Mol Biol. 2022.

Abstract

Cell-free biosensors hold a great potential as alternatives for traditional analytical chemistry methods providing low-cost low-resource measurement of specific chemicals. However, their large-scale use is limited by the complexity of their development.In this chapter, we present a standard methodology based on computer-aided design (CAD ) tools that enables fast development of new cell-free biosensors based on target molecule information transduction and reporting through metabolic and genetic layers, respectively. Such systems can then be repurposed to represent complex computational problems, allowing defined multiplex sensing of various inputs and integration of artificial intelligence in synthetic biological systems.

Keywords: Artificial neural networks; CAD; Machine learning; Metabolite biosensors; Perceptron; Transcription factors.

PubMed Disclaimer

References

    1. van der Meer JR, Belkin S (2010) Where microbiology meets microengineering: design and applications of reporter bacteria. Nat Rev Microbiol 8:511–522. https://doi.org/10.1038/nrmicro2392 - DOI - PubMed
    1. Chang H-J, Voyvodic PL, Zúñiga A, Bonnet J (2017) Microbially derived biosensors for diagnosis, monitoring and epidemiology. Microb Biotechnol 10:1031–1035. https://doi.org/10.1111/1751-7915.12791 - DOI - PubMed - PMC
    1. Rodriguez-Mozaz S, de Alda MJL, Marco M-P, Barceló D (2005) Biosensors for environmental monitoring: a global perspective. Talanta 65:291–297. https://doi.org/10.1016/j.talanta.2004.07.006 - DOI - PubMed
    1. Koch M, Pandi A, Borkowski O et al (2019) Custom-made transcriptional biosensors for metabolic engineering. Curr Opin Biotechnol 59:78–84. https://doi.org/10.1016/j.copbio.2019.02.016 - DOI - PubMed
    1. Zhang L, Guo W, Lu Y (2020) Advances in cell-free biosensors: principle, mechanism, and applications. Biotechnol J 15:2000187. https://doi.org/10.1002/biot.202000187 - DOI

Publication types

MeSH terms

LinkOut - more resources