The impact of AlphaFold2 one year on
- PMID: 35017725
- DOI: 10.1038/s41592-021-01365-3
The impact of AlphaFold2 one year on
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References
-
- Pereira, J. et al. Proteins 89, 1687–1699 (2021). - DOI
-
- Jumper, J. et al. Nature 596, 583–589 (2021). - DOI
-
- Tunyasuvunakool, K. et al. Nature 596, 590–596 (2021). - DOI
-
- Suzek, B. E., Huang, H., McGarvey, P., Mazumder, R. & Wu, C. H. Bioinformatics 23, 1282–1288 (2007). - DOI
-
- Vaswani, A. et al. in Advances in Neural Information Processing Systems 31 (NIPS 2017) Proceedings (ed. Guyon, I. et al.) 5998–6008 (Association for Computing Machinery, 2017).
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