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. 2022 Jan 17;7(1):199-201.
doi: 10.1080/23802359.2021.1944378. eCollection 2022.

The complete mitochondrial genome of Nais communis Piguet, 1906 (Annelida; Clitellata; Naididae)

Affiliations

The complete mitochondrial genome of Nais communis Piguet, 1906 (Annelida; Clitellata; Naididae)

Jeounghee Lee et al. Mitochondrial DNA B Resour. .

Abstract

The complete mitochondrial genome of Nais communis was analyzed using the Illumina Hiseq 2000 platform. The length of the complete mitochondrial genome was 15,685 bp, and the data were submitted to NCBI (MW770354). The genome contained 13 protein-coding genes (PCGs), 2 rRNA genes, 22 tRNA genes, and a putative control region. A phylogenetic tree was constructed based on the sequences of 13 PCGs identified by the maximum-likelihood method. Regardless of the lack of studies on the complete mitochondrial genome of other aquatic oligochaetes, the phylogenetic tree showed N. communis to cluster with Tubifex tubifex and Limnodrilus hoffmeisteri with high support value, and the freshwater oligochaete and earthworm groups to be sister groups.

Keywords: Freshwater Oligochaeta; Nais communis; complete mitochondrial genome; phylogenetic analysis.

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Conflict of interest statement

No potential conflict of interest was reported by the authors.

Figures

Figure 1.
Figure 1.
Molecular phylogeny of N. communis (MW770354), one species in freshwater oligochaete, 10 species in annelids, and outgroup species based on complete mitogenome. The complete mitogenomes are downloaded from GenBank and the phylogenetic tree is constructed by the Maximum-likelihood method with 1000 bootstrap replicates.

References

    1. Arimoro FO, Ikomi RB, Iwegbue CM.. 2007. Ecology and abundance of oligochaetes as indicators of organic pollution in an urban stream in southern Nigeria. Pak J Biol Sci. 10:446–453. - PubMed
    1. Arslan N, Mercan D.. 2018. Water quality determination of the lakes Mogan and Cernek (Turkey) by using macroinvertebrates accordance with water framework directive. Paper presented at: “UNITECH 2018” International Scientific Conference, 16-17 November 2018, Gabrovo, 510–518 pp.
    1. Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF.. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319. - PubMed
    1. Bonacina C, Bonomi G, Pasteris A.. 1992. Some remarks on the macrobenthos community of the profundal zone of the large Italian lakes. Mem Inst Ital Idrobiol. 50:79–106.
    1. Brinkhurst RO, Jamieson BGM.. 1971. Aquatic Oligochaeta of the world. Edinburgh: Oliver and Boyd. 860 pp.

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