Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2022 Feb 11;24(5):1224-1227.
doi: 10.1021/acs.orglett.2c00018. Epub 2022 Jan 31.

Synthesis of Polycyclic Isoindolines via α-C-H/N-H Annulation of Alicyclic Amines

Affiliations

Synthesis of Polycyclic Isoindolines via α-C-H/N-H Annulation of Alicyclic Amines

Anirudra Paul et al. Org Lett. .

Abstract

Relatively unstable cyclic imines, generated in situ from their corresponding alicyclic amines via oxidation of their lithium amides with simple ketone oxidants, engage aryllithium compounds containing a leaving group on an ortho-methylene functionality to provide polycyclic isoindolines in a single operation. The scope of this transformation includes pyrrolidine, piperidine, azepane, azocane, and piperazines.

PubMed Disclaimer

Figures

Scheme 1.
Scheme 1.
Overview of methods for amine α-C–H/N–H annulation
Scheme 2.
Scheme 2.. Scope of the reaction.
Reactions were performed with 0.5 mmol of 1. Yields correspond to isolated yields of chromatographically purified product. A mixture of ether (1 mL) and THF (1 mL) was used for the lithiation of 1. Cyclic imines were prepared in situ by adding n-BuLi (2 equiv) to a solution of the corresponding cyclic amine (2 equiv) in ether (1 mL) at −78 °C, followed by the addition of trifluoroacetophenone (2.05 equiv). a A mixture of ether (1.8 mL) and THF (0.2 mL) was used for the lithiation of 1. b THF (1 mL) was used for the lithiation and cyclic imine was prepared in situ by adding n-BuLi (2 equiv) to a solution of cyclic amine (2 equiv) in ether (1.5 mL) at −78 °C, followed by the addition of trifluoroacetophenone (2.05 equiv) in 1 mL of ether.

Similar articles

Cited by

References

    1. Taylor RD; MacCoss M; Lawson ADG, Rings in Drugs. J. Med. Chem 2014, 57, 5845–5859 - PubMed
    2. Vitaku E; Smith DT; Njardarson JT, Analysis of the Structural Diversity, Substitution Patterns, and Frequency of Nitrogen Heterocycles among U.S. FDA Approved Pharmaceuticals. J. Med. Chem 2014, 57, 10257–10274. - PubMed
    1. For a general overview of amine C–H bond functionalization, see

    2. Dutta S; Li B; Rickertsen DRL; Valles DA; Seidel D, C–H Bond Functionalization of Amines: A Graphical Overview of Diverse Methods. SynOpen 2021, 05, 173–228. - PMC - PubMed
    3. Other selected reviews

    4. Campos KR, Direct sp3 C-H bond activation adjacent to nitrogen in heterocycles. Chem. Soc. Rev 2007, 36, 1069–1084 - PubMed
    5. Jazzar R; Hitce J; Renaudat A; Sofack-Kreutzer J; Baudoin O, Functionalization of Organic Molecules by Transition-Metal-Catalyzed C(sp3)-H Activation. Chem. Eur. J 2010, 16, 2654–2672 - PubMed
    6. Mitchell EA; Peschiulli A; Lefevre N; Meerpoel L; Maes BUW, Direct alpha-Functionalization of Saturated Cyclic Amines. Chem. Eur. J 2012, 18, 10092–10142 - PubMed
    7. Peng B; Maulide N, The Redox-Neutral Approach to C-H Functionalization. Chem. Eur. J 2013, 19, 13274–13287 - PubMed
    8. Girard SA; Knauber T; Li C-J, The Cross-Dehydrogenative Coupling of C sp3-H Bonds: A Versatile Strategy for C-C Bond Formations. Angew. Chem. Int. Ed 2014, 53, 74–100 - PubMed
    9. Haibach MC; Seidel D, C-H Bond Functionalization through Intramolecular Hydride Transfer. Angew. Chem. Int. Ed 2014, 53, 5010–5036 - PubMed
    10. Beatty JW; Stephenson CRJ, Amine Functionalization via Oxidative Photoredox Catalysis: Methodology Development and Complex Molecule Synthesis. Acc. Chem. Res 2015, 48, 1474–1484 - PMC - PubMed
    11. Cheng M-X; Yang S-D, Recent Advances in the Enantioselective Oxidative α-C–H Functionalization of Amines. Synlett 2017, 28, 159–174
    12. Chu JCK; Rovis T, Complementary Strategies for Directed C(sp3)−H Functionalization: A Comparison of Transition-Metal-Catalyzed Activation, Hydrogen Atom Transfer, and Carbene/Nitrene Transfer. Angew. Chem. Int. Ed 2018, 57, 62–101 - PMC - PubMed
    13. Stateman LM; Nakafuku KM; Nagib DA, Remote C–H Functionalization via Selective Hydrogen Atom Transfer. Synthesis 2018, 50, 1569–1586 - PMC - PubMed
    14. Edwards PM; Schafer LL, Early transition metal-catalyzed C–H alkylation: hydroaminoalkylation for Csp3–Csp3 bond formation in the synthesis of selectively substituted amines. Chem. Commun 2018, 54, 12543–12560 - PubMed
    15. Gonnard L; Guérinot A; Cossy J, Transition metal-catalyzed α-alkylation of amines by C(sp3)‒H bond activation. Tetrahedron 2019, 75, 145–163
    16. Liu S; Zhao Z; Wang Y, Construction of N-Heterocycles through Cyclization of Tertiary Amines. Chem. Eur. J 2019, 25, 2423–2441 - PubMed
    17. Antermite D; Bull JA, Transition Metal-Catalyzed Directed C(sp3)–H Functionalization of Saturated Heterocycles. Synthesis 2019, 51, 3171–3204
    18. Zhang T; Wu Y-H; Wang N-X; Xing Y, Advances in C(sp3)–H Bond Functionalization via Radical Processes. Synthesis 2019, 51, 4531–4548
    19. Trowbridge A; Walton SM; Gaunt MJ, New Strategies for the Transition-Metal Catalyzed Synthesis of Aliphatic Amines. Chem. Rev 2020, 120, 2613–2692 - PubMed
    20. Kapoor M; Singh A; Sharma K; Hua Hsu M, Site-Selective C(sp3)−H and C(sp2)−H Functionalization of Amines Using a Directing-Group-Guided Strategy. Adv. Synth. Catal 2020, 362, 4513–4542
    21. An X-D; Xiao J, Recent advances in hydride transfer-involved C(sp3)–H activation reactions. Org. Chem. Front 2021, 8, 1364–1383
    22. Basak S; Winfrey L; Kustiana BA; Melen RL; Morrill LC; Pulis AP, Electron deficient borane-mediated hydride abstraction in amines: stoichiometric and catalytic processes. Chem. Soc. Rev 2021, 50, 3720–3737 - PubMed
    23. Caplin MJ; Foley DJ, Emergent synthetic methods for the modular advancement of sp3-rich fragments. Chem. Sci 2021, 12, 4646–4660; - PMC - PubMed
    24. Ohno S; Miyoshi M; Murai K; Arisawa M, Non-Directed β- or γ-C(sp3)–H Functionalization of Saturated Nitrogen-Containing Heterocycles. Synthesis 2021, 53, 2947–2960
    25. He Y; Zheng Z; Yang J; Zhang X; Fan X, Recent advances in the functionalization of saturated cyclic amines. Org. Chem. Front 2021, 8, 4582–4606.
    1. Selected recent examples of mechanistically diverse methods for amine C–H bond functionalization

    2. Ohmatsu K; Suzuki R; Furukawa Y; Sato M; Ooi T, Zwitterionic 1,2,3-Triazolium Amidate as a Catalyst for Photoinduced Hydrogen-Atom Transfer Radical Alkylation. ACS Catal 2020, 10, 2627–2632
    3. Roque JB; Kuroda Y; Jurczyk J; Xu L-P; Ham JS; Göttemann LT; Roberts CA; Adpressa D; Saurí J; Joyce LA; Musaev DG; Yeung CS; Sarpong R, C–C Cleavage Approach to C–H Functionalization of Saturated Aza-Cycles. ACS Catal. 2020, 10, 2929–2941 - PMC - PubMed
    4. Rand AW; Yin H; Xu L; Giacoboni J; Martin-Montero R; Romano C; Montgomery J; Martin R, Dual Catalytic Platform for Enabling sp3 α C–H Arylation and Alkylation of Benzamides. ACS Catal. 2020, 10, 4671–4676
    5. Liu W; Babl T; Röther A; Reiser O; Davies HML, Functionalization of Piperidine Derivatives for the Site-Selective and Stereoselective Synthesis of Positional Analogues of Methylphenidate. Chem. Eur. J 2020, 26, 4236–4241 - PMC - PubMed
    6. Verma P; Richter JM; Chekshin N; Qiao JX; Yu J-Q, Iridium(I)-Catalyzed α-C(sp3)–H Alkylation of Saturated Azacycles. J. Am. Chem. Soc 2020, 142, 5117–5125 - PMC - PubMed
    7. Walker MM; Koronkiewicz B; Chen S; Houk KN; Mayer JM; Ellman JA, Highly Diastereoselective Functionalization of Piperidines by Photoredox-Catalyzed α-Amino C–H Arylation and Epimerization. J. Am. Chem. Soc 2020, 142, 8194–8202 - PMC - PubMed
    8. Chen L; Yang Y; Liu L; Gao Q; Xu S, Iridium-Catalyzed Enantioselective α-C(sp3)–H Borylation of Azacycles. J. Am. Chem. Soc 2020, 142, 12062–12068 - PubMed
    9. Xu L-P; Roque JB; Sarpong R; Musaev DG, Reactivity and Selectivity Controlling Factors in the Pd/Dialkylbiarylphosphine-Catalyzed C–C Cleavage/Cross-Coupling of an N-Fused Bicyclo α-Hydroxy-β-Lactam. J. Am. Chem. Soc 2020, 142, 21140–21152 - PubMed
    10. Feng K; Quevedo RE; Kohrt JT; Oderinde MS; Reilly U; White MC, Late-stage oxidative C(sp3)–H methylation. Nature 2020, 580, 621–627 - PMC - PubMed
    11. Sarver PJ; Bacauanu V; Schultz DM; DiRocco DA; Lam Y.-h.; Sherer EC; MacMillan DWC, The merger of decatungstate and copper catalysis to enable aliphatic C(sp3)–H trifluoromethylation. Nat. Chem 2020, 12, 459–467 - PubMed
    12. McManus JB; Onuska NPR; Jeffreys MS; Goodwin NC; Nicewicz DA, Site-Selective C–H Alkylation of Piperazine Substrates via Organic Photoredox Catalysis. Org. Lett 2020, 22, 679–683 - PubMed
    13. Cao L; Zhao H; Tan Z; Guan R; Jiang H; Zhang M, Ruthenium-Catalyzed Hydrogen Evolution o-Aminoalkylation of Phenols with Cyclic Amines. Org. Lett 2020, 22, 4781–4785 - PubMed
    14. Chen Y; Wan H-L; Huang Y; Liu S; Wang F; Lu C; Nie J; Chen Z; Yang G; Ma C, B(C6F5)3-Catalyzed β-Functionalization of Pyrrolidines Using Isatins via Borrowing Hydrogen: Divergent Access to Substituted Pyrrolidines and Pyrroles. Org. Lett 2020, 22, 7797–7803 - PubMed
    15. Oeschger R; Su B; Yu I; Ehinger C; Romero E; He S; Hartwig J, Diverse functionalization of strong alkyl C–H bonds by undirected borylation. Science 2020, 368, 736–741 - PMC - PubMed
    16. Short MA; Blackburn JM; Roizen JL, Modifying Positional Selectivity in C–H Functionalization Reactions with Nitrogen-Centered Radicals: Generalizable Approaches to 1,6-Hydrogen-Atom Transfer Processes. Synlett 2020, 31, 102–116 - PMC - PubMed
    17. Kim Y; Heo J; Kim D; Chang S; Seo S, Ring-opening functionalizations of unstrained cyclic amines enabled by difluorocarbene transfer. Nat. Commun 2020, 11, 4761. - PMC - PubMed
    18. Trindade AF; Faulkner EL; Leach AG; Nelson A; Marsden SP, Fragment-oriented synthesis: β-elaboration of cyclic amine fragments using enecarbamates as platform intermediates. Chem. Commun 2020, 56, 8802–8805 - PubMed
    19. Holmberg-Douglas N; Choi Y; Aquila B; Huynh H; Nicewicz DA, β-Functionalization of Saturated Aza-Heterocycles Enabled by Organic Photoredox Catalysis. ACS Catal. 2021, 11, 3153–3158 - PMC - PubMed
    20. Yi M-J; Zhang H-X; Xiao T-F; Zhang J-H; Feng Z-T; Wei L-P; Xu G-Q; Xu P-F, Photoinduced Metal-Free α-C(sp3)–H Carbamoylation of Saturated Aza-Heterocycles via Rationally Designed Organic Photocatalyst. ACS Catal. 2021, 11, 3466–3472
    21. Aguilera EY; Sanford MS, Palladium-Mediated Cγ−H Functionalization of Alicyclic Amines. Angew. Chem. Int. Ed 2021, 60, 11227–11230 - PMC - PubMed
    22. Chang Y; Cao M; Chan JZ; Zhao C; Wang Y; Yang R; Wasa M, Enantioselective Synthesis of N-Alkylamines through β-Amino C–H Functionalization Promoted by Cooperative Actions of B(C6F5)3 and a Chiral Lewis Acid Co-Catalyst. J. Am. Chem. Soc 2021, 143, 2441–2455 - PMC - PubMed
    23. Yue W-J; Day CS; Martin R, Site-Selective Defluorinative sp3 C–H Alkylation of Secondary Amides. J. Am. Chem. Soc 2021, 143, 6395–6400 - PubMed
    24. Koperniku A; Schafer LL, Zirconium Catalyzed Hydroaminoalkylation for the Synthesis of α-Arylated Amines and N-Heterocycles. Chem. Eur. J 2021, 27, 6334–6339. - PubMed
    1. For a comprehensive review, see

    2. Chen W; Seidel D, Condensation-Based Methods for the C–H Bond Functionalization of Amines. Synthesis 2021, 53, 3869–3908. Selected examples of redox-annulations - PMC - PubMed
    3. Zhang C; De CK; Mal R; Seidel D, alpha-Amination of Nitrogen Heterocycles: Ring-Fused Aminals. J. Am. Chem. Soc 2008, 130, 416–417 - PubMed
    4. Zheng L; Yang F; Dang Q; Bai X, A Cascade Reaction with Iminium Ion Isomerization as the Key Step Leading to Tetrahydropyrimido[4,5-d]pyrimidines. Org. Lett 2008, 10, 889–892 - PubMed
    5. Zhang C; Das D; Seidel D, Azomethine ylide annulations: facile access to polycyclic ring systems. Chem. Sci 2011, 2, 233–236
    6. Dieckmann A; Richers MT; Platonova AY; Zhang C; Seidel D; Houk KN, Metal-Free α-Amination of Secondary Amines: Computational and Experimental Evidence for Azaquinone Methide and Azomethine Ylide Intermediates. J. Org. Chem 2013, 78, 4132–4144 - PMC - PubMed
    7. Richers MT; Breugst M; Platonova AY; Ullrich A; Dieckmann A; Houk KN; Seidel D, Redox-Neutral α-Oxygenation of Amines: Reaction Development and Elucidation of the Mechanism. J. Am. Chem. Soc 2014, 136, 6123–6135 - PMC - PubMed
    8. Kang Y; Chen W; Breugst M; Seidel D, Asymmetric Redox-Annulation of Cyclic Amines. J. Org. Chem 2015, 80, 9628–9640 - PMC - PubMed
    9. Chen W; Seidel D, Redox-Annulation of Cyclic Amines and β-Ketoaldehydes. Org. Lett 2016, 18, 1024–1027 - PMC - PubMed
    10. Li J; Fu Y; Qin C; Yu Y; Li H; Wang W, Asymmetric synthesis of isoquinolinonaphthyridines catalyzed by a chiral Bronsted acid. Org. Biomol. Chem 2017, 15, 6474–6477 - PubMed
    11. Liu Y; Wu J; Jin Z; Jiang H, Synthesis of 1,2-Fused Bicyclic Imidazolidin-4-ones by Redox-Neutral Cyclization Reaction of Cyclic Amines and α-Ketoamides. Synlett 2018, 29, 1061–1064
    12. Paul A; Chandak HS; Ma L; Seidel D, Redox-Annulations of Cyclic Amines with ortho-Cyanomethylbenzaldehydes. Org. Lett 2020, 22, 976–980 - PMC - PubMed
    13. Rickertsen DRL; Ma L; Paul A; Abboud KA; Seidel D, Traceless Redox-Annulations of Alicyclic Amines. SynOpen 2020, 04, 123–131. - PMC - PubMed
    1. Speck K; Magauer T, The chemistry of isoindole natural products. Beilstein J. Org. Chem 2013, 9, 2048–2078. - PMC - PubMed