Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2022 Mar 4;24(8):1678-1683.
doi: 10.1021/acs.orglett.2c00267. Epub 2022 Feb 24.

Decarbonylative Pd-Catalyzed Suzuki Cross-Coupling for the Synthesis of Structurally Diverse Heterobiaryls

Affiliations

Decarbonylative Pd-Catalyzed Suzuki Cross-Coupling for the Synthesis of Structurally Diverse Heterobiaryls

Alejandro Cervantes-Reyes et al. Org Lett. .

Abstract

Heteroaromatic biaryls are core scaffolds found in a plethora of pharmaceuticals; however, their direct synthesis by the Suzuki cross-coupling is limited to heteroaromatic halide starting materials. Here, we report a direct synthesis of diverse nitrogen-containing heteroaromatic biaryls by Pd-catalyzed decarbonylative Suzuki cross-coupling of widely available heterocyclic carboxylic acids with arylboronic acids. The practical and modular nature of this cross-coupling enabled the straightforward preparation of >45 heterobiaryl products using pyridines, pyrimidines, pyrazines, and quinolines in excellent yields. We anticipate that the modular nature of this protocol will find broad application in medicinal chemistry and drug discovery research.

PubMed Disclaimer

Figures

Figure 1.
Figure 1.
Analysis of Available Building Blocks at Pfizer. The Pfizer file and the Quick Building Block collection were sorted by heterocycle across the carboxylic acid and halide functional groups and a count was performed. Structures that were available as both functional groups were filtered out to highlight the unique space that each set offers. Blue represents a count of >300 unique building blocks while red represents <20 unique building blocks.
Figure 2.
Figure 2.
Selected Examples of Carboxylic Acid Monomers with Greater Availability.
Figure 3.
Figure 3.
(A) Selected examples of pharmaceuticals containing heteroaromatic biaryls. (B) Decarbonylative cross-coupling reactions of arene carboxylic acids. (C) Present work: heterocyclic carboxylic acids.
Scheme 1.
Scheme 1.. Decarbonylative Cross-Coupling of Pyridine-3-Carboxylic Acid with Various Aryl Boronic Acidsa
aConditions: Pyridine-3-carboxylic acid (1.0 equiv), Ar-B(OH)2 (2 equiv), Piv2O (2.0 equiv), Pd(OAc)2 (10 mol%), L6 (5 mol%), H3BO3 (2 equiv), Et3N (1.75 equiv), dioxane (0.20 M), 160 °C, 15 h.
Scheme 2.
Scheme 2.. Scope of Heterocyclic Carboxylic Acids in the Pd-Catalyzed Suzuki–Miyaura Biaryl Synthesis
aConditions: Carboxylic acid (1.0 equiv), 4-MeO-C6H4B(OH)2 (2 equiv), Piv2O (2.0 equiv), Pd(OAc)2 (10 mol%), L6 (5 mol%), H3BO3 (2 equiv), Et3N (1.75 equiv), dioxane (0.20 M), 160 °C, 15 h.
Scheme 3.
Scheme 3.. Scope of (Hetero)Aryl Boronic Acids in the Pd-Catalyzed Suzuki–Miyaura Biaryl Synthesis
aConditions: HetAr–CO2H (1.0 equiv), Ar–B(OH)2 (2 equiv), Piv2O (2.0 equiv), Pd(OAc)2 (10 mol%), L6 (5 mol%), H3BO3 (2 equiv), Et3N (1.75 equiv), dioxane (0.20 M), 160 °C, 15 h.
Scheme 4.
Scheme 4.
Mechanistic Studies

Similar articles

References

    1. Baumann M; Baxendale IR An overview of the synthetic routes to the best-selling drugs containing 6-membered heterocycles. Beilstein J. Org. Chem 2013, 9, 2265–2319. - PMC - PubMed
    2. World Health Organization. The use of stems in the selection of International Nonproprietary Names (INN) for pharmaceutical substances 2018. https://apps.who.int/iris/handle/10665/275695 (accessed, Jan 24, 2022). - PMC - PubMed
    3. Arora A; Scholar EM Role of Tyrosine Kinase Inhibitors in Cancer Therapy. J. Pharmacol. Exp. Ther 2005, 315, 971–979. - PubMed
    4. Morphy R Selectively Nonselective Kinase Inhibition: Striking the Right Balance. J. Med. Chem 2010, 53, 1413–1437. - PubMed
    5. Berg S; Bergh M; Hellberg S; Hogdin K; Lo-Alfredsson Y; Soderman P; von Berg S; Weigelt T; Ormo M; Xue Y; Tucker J; Neelissen J; Jerning E; Nilsson Y; Bhat R Discovery of novel potent and highly selective glycogen synthase kinase-3beta (GSK3beta) inhibitors for Alzheimer’s disease: design, synthesis, and characterization of pyrazines. J. Med. Chem 2012, 55, 9107–9119. - PubMed
    6. Tan C; Gilligan D; Pacey S Treatment approaches for EGFR-inhibitor-resistant patients with non-small-cell lung cancer. Lancet Oncol. 2015, 16, e447–e459. - PubMed
    1. Miyaura N; Yanagi T; Suzuki A The Palladium-Catalyzed Cross-Coupling Reaction of Phenylboronic Acid with Haloarenes in the Presence of Bases. Synth. Commun 1981, 11, 513–519.
    2. Miyaura N; Suzuki A Palladium-Catalyzed Cross-Coupling Reactions of Organoboron Compounds. Chem. Rev 1995, 95, 2457–2483
    1. Helal CJ; Bundesmann M; Hammond S; Holmstrom M; Klug-McLeod J; Lefker BA; McLeod D; Subramanyam C; Zakaryants O; Sakata S Quick Building Blocks (QBB): An Innovative and Efficient Business Model to Speed Medicinal Chemistry Analog Synthesis. ACS Med. Chem. Lett 2019, 10, 1104–1109. - PMC - PubMed
    1. For a recent comprehensive review, see:

    2. Lu H; Yu T-Y; Xu P-F; Wei H Selective Decarbonylation via Transition-Metal-Catalyzed Carbon–Carbon Bond Cleavage. Chem. Rev 2021, 121, 365–411. - PubMed
    3. For earlier studies, see:

    4. Dzik WI; Lange PP; Gooßen LJ Carboxylates as sources of carbon nucleophiles and electrophiles: comparison of decarboxylative and decarbonylative pathways. Chem. Sci 2012, 3, 2671–2678.
    5. Guo L; Rueping M Decarbonylative Cross-Couplings: Nickel Catalyzed Functional Group Interconversion Strategies for the Construction of Complex Organic Molecules. Acc. Chem. Res 2018, 51, 1185–1195. - PubMed
    6. Liu C; Szostak M Decarbonylative Cross-Coupling of Amides. Org. Biomol. Chem 2018, 16, 7998–8010. - PubMed
    7. Zhao Q; Szostak M Redox-neutral decarbonylative cross-couplings coming of age. ChemSusChem 2019, 12, 2983–2987. - PubMed
    8. Wang Z; Wang X; Nishihara Y Nickel or Palladium-Catalyzed Decarbonylative Transformations of Carboxylic Acid Derivative. Chem. Asian J 2020, 15, 1234–1247. - PubMed
    1. Becht J-M; Catala C; Le Drian C; Wagner A Synthesis of Biaryls via Decarboxylative Pd-Catalyzed Cross-Coupling Reaction. Org. Lett 2007, 9, 1781–1783. - PubMed
    2. Yanagisawa S; Ueda K; Taniguchi T; Itami K Potassium t-Butoxide Alone Can Promote the Biaryl Coupling of Electron-Deficient Nitrogen Heterocycles and Haloarenes. Org. Lett 2008, 10, 4673–4676. - PubMed
    3. Nandi D; Jhou Y-M; Lee J-Y; Kuo B-C; Liu C-Y; Huang P-W; Lee HM Pd(0)-Catalyzed Decarboxylative Coupling and Tandem C-H Arylation/Decarboxylation for the Synthesis of Heteroaromatic Biaryls. J. Org. Chem 2012, 77, 9384–9390. - PubMed
    4. Cornella J; Larrosa I Decarboxylative carbon-carbon bond-forming transformations of (hetero)aromatic carboxylic acids. Synthesis 2012, 44, 653–656.
    5. Wei Y; Hu P; Zhang M; Su W Metal-Catalyzed Decarboxylative C–H Functionalization. Chem. Rev 2017, 117, 8864–8907. - PubMed
    6. Even in gold catalysis decarbonylative reactions are known:

    7. Bucher J; Stößer T; Rudolph M; Rominger F; Hashmi ASK CO Extrusion in Homogeneous Gold Catalysis: Reactivity of Gold Acyl Species Generated through Water Addition to Gold Vinylidenes. Angew. Chem. Int. Ed 2015, 54, 1666–1670. - PubMed

Publication types

MeSH terms