Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Comment
. 2022 Apr;41(4):1000-1003.
doi: 10.1109/TMI.2022.3157048.

Author's Reply to "MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge"

Comment

Author's Reply to "MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge"

Ruchika Verma et al. IEEE Trans Med Imaging. 2022 Apr.

Abstract

We had released MoNuSAC2020 as one of the largest publicly available, manually annotated, curated, multi-class, and multi-instance medical image segmentation datasets. Based on this dataset, we had organized a challenge at the International Symposium on Biomedical Imaging (ISBI) 2020. Along with the challenge participants, we had published an article summarizing the results and findings of the challenge (Verma et al., 2021). Foucart et al. (2022) in their "Analysis of the MoNuSAC 2020 challenge evaluation and results: metric implementation errors" have pointed ways in which the computation of the segmentation performance metric for the challenge can be corrected or improved. After a careful examination of their analysis, we have found a small bug in our code and an erroneous column-header swap in one of our result tables. Here, we present our response to their analysis, and issue an errata. After fixing the bug the challenge rankings remain largely unaffected. On the other hand, two of Foucart et al.'s other suggestions are good for future consideration, but it is not clear that those should be immediately implemented. We thank Foucart et al. for their detailed analysis to help us fix the two errors.

PubMed Disclaimer

Comment on

  • MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge.
    Verma R, Kumar N, Patil A, Kurian NC, Rane S, Graham S, Vu QD, Zwager M, Raza SEA, Rajpoot N, Wu X, Chen H, Huang Y, Wang L, Jung H, Brown GT, Liu Y, Liu S, Jahromi SAF, Khani AA, Montahaei E, Baghshah MS, Behroozi H, Semkin P, Rassadin A, Dutande P, Lodaya R, Baid U, Baheti B, Talbar S, Mahbod A, Ecker R, Ellinger I, Luo Z, Dong B, Xu Z, Yao Y, Lv S, Feng M, Xu K, Zunair H, Hamza AB, Smiley S, Yin TK, Fang QR, Srivastava S, Mahapatra D, Trnavska L, Zhang H, Narayanan PL, Law J, Yuan Y, Tejomay A, Mitkari A, Koka D, Ramachandra V, Kini L, Sethi A. Verma R, et al. IEEE Trans Med Imaging. 2021 Dec;40(12):3413-3423. doi: 10.1109/TMI.2021.3085712. Epub 2021 Nov 30. IEEE Trans Med Imaging. 2021. PMID: 34086562

LinkOut - more resources