Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2023 Jan;14(1):e1732.
doi: 10.1002/wrna.1732. Epub 2022 Apr 15.

The story of rRNA expansion segments: Finding functionality amidst diversity

Affiliations
Review

The story of rRNA expansion segments: Finding functionality amidst diversity

Nivedita Hariharan et al. Wiley Interdiscip Rev RNA. 2023 Jan.

Abstract

Expansion segments (ESs) are multinucleotide insertions present across phyla at specific conserved positions in eukaryotic rRNAs. ESs are generally absent in bacterial rRNAs with some exceptions, while the archaeal rRNAs have microexpansions at regions that coincide with those of eukaryotic ESs. Although there is an increasing prominence of ribosomes, especially the ribosomal proteins, in fine-tuning gene expression through translation regulation, the role of rRNA ESs is relatively underexplored. While rRNAs have been established as the major catalytic hub in ribosome function, the presence of ESs widens their scope as a species-specific regulatory hub of protein synthesis. In this comprehensive review, we have elaborately discussed the current understanding of the functional aspects of rRNA ESs of cytoplasmic eukaryotic ribosomes and discuss their past, present, and future. This article is categorized under: RNA Structure and Dynamics > Influence of RNA Structure in Biological Systems Translation > Ribosome Structure/Function Translation > Regulation.

Keywords: expansion segments; rRNA; ribosome; translation regulation.

PubMed Disclaimer

References

REFERENCES
    1. Aitken, C. E., & Lorsch, J. R. (2012). A mechanistic overview of translation initiation in eukaryotes. Nature Structural & Molecular Biology, 19(6), 568-576.
    1. Alkemar, G., & Nygård, O. (2003). A possible tertiary rRNA interaction between expansion segments ES3 and ES6 in eukaryotic 40S ribosomal subunits. RNA, 9(1), 20-24.
    1. Alkemar, G., & Nygård, O. (2004). Secondary structure of two regions in expansion segments ES3 and ES6 with the potential of forming a tertiary interaction in eukaryotic 40S ribosomal subunits. RNA, 10(3), 403-411.
    1. Alkemar, G., & Nygård, O. (2006). Probing the secondary structure of expansion segment ES6 in 18S ribosomal RNA. Biochemistry, 45(26), 8067-8078.
    1. Amunts, A., Brown, A., Bai, X.-C., Llácer, J. L., Hussain, T., Emsley, P., Long, F., Murshudov, G., Scheres, S. H. W., & Ramakrishnan, V. (2014). Structure of the yeast mitochondrial large ribosomal subunit. Science, 343(6178), 1485-1489.

Publication types

MeSH terms

LinkOut - more resources