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. 2022 Mar:6:e2100173.
doi: 10.1200/CCI.21.00173.

OSPred Tool: A Digital Health Aid for Rapid Predictive Analysis of Correlations Between Early End Points and Overall Survival in Non-Small-Cell Lung Cancer Clinical Trials

Affiliations

OSPred Tool: A Digital Health Aid for Rapid Predictive Analysis of Correlations Between Early End Points and Overall Survival in Non-Small-Cell Lung Cancer Clinical Trials

Khader Shameer et al. JCO Clin Cancer Inform. 2022 Mar.

Abstract

Purpose: Overall survival (OS) is the gold standard end point for establishing clinical benefits in phase III oncology trials. However, these trials are associated with low success rates, largely driven by failure to meet the primary end point. Surrogate end points such as progression-free survival (PFS) are increasingly being used as indicators of biologic drug activity and to inform early go/no-go decisions in oncology drug development. We developed OSPred, a digital health aid that combines actual clinical data and machine intelligence approaches to visualize correlation trends between early (PFS-based) and late (OS) end points and provide support for shared decision making in the drug development pipeline.

Methods: OSPred is based on a trial-level data set of 81 reports (35 anticancer drugs with various mechanisms of action; 156 observations) in non-small-cell lung cancer (NSCLC). OSPred was developed using R Shiny, with packages ggplot2, metafor, boot, dplyr, and mvtnorm, to analyze and visualize correlation results and predict OS hazard ratio (HR OS) on the basis of user-inputted PFS-based data, namely, HR PFS, or the odds ratio of PFS at 4 (OR PFS4) or 6 (OR PFS6) months.

Results: The three main features of the tool are as follows: prediction of HR OS on the basis of user-inputted early end point values; visualization of comparisons of the user's investigational drug with other drugs in the NSCLC setting, including by specific MoA; and creation of a probability density chart, providing point prediction and CIs for HR OS. A working version of the tool for download is linked.

Conclusion: The OSPred tool offers interactive visualization of clinical trial end point correlations with reference to a large pool of historical NSCLC studies. Its focused capability has the potential to digitally transform and accelerate data-driven decision making as part of the drug development process.

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Conflict of interest statement

Shameer KhaderEmployment: AstraZenecaPatents, Royalties, Other Intellectual Property: Coauthor of an AI patent for Automation for Clinical Event Adjudication Andrzej ProkopEmployment: AstraZeneca Pharma PolandHonoraria: AstraZeneca Sreenath NampallyEmployment: AstraZeneca/MedImmune, BayerStock and Other Ownership Interests: AstraZeneca Jim WeatherallEmployment: AstraZenecaStock and Other Ownership Interests: AstraZeneca Renee Bailey IaconaEmployment: AstraZenecaStock and Other Ownership Interests: AstraZeneca Faisal M. KhanEmployment: AstraZeneca, Novo NordiskStock and Other Ownership Interests: AstraZeneca, Novo NordiskPatents, Royalties, Other Intellectual Property: Patent applied through AstraZenecaTravel, Accommodations, Expenses: AstraZeneca, Novo NordiskNo other potential conflicts of interest were reported.

Figures

FIG 1.
FIG 1.
Clinical trial curation and end points data extraction workflow. AZ, AstraZeneca; CSR, clinical study reports; OS, overall survival; PFS, progression-free survival; PFS 4/6, progression-free survival at 4 and 6 months.
FIG 2.
FIG 2.
Development of the OSPred digital dashboard. AZ, AstraZeneca; HR, hazard ratio; NSCLC, non–small-cell lung cancer; OR, odds ratio; OS, overall survival; PFS, progression-free survival; REML, restricted maximum likelihood.
FIG 3.
FIG 3.
OSPred dashboard for interactive analysis of early-to-late end points in clinical trials of NSCLC. In the regression plot, the purple circles represent the historical data inputted into the model (in this example, for the specific MoA selected), and the point prediction of HR OS is highlighted by the green X. In the probability density chart, the point prediction for HR OS is represented by the black line and the red line represents the CIs for HR OS; if the point prediction is less than or equal to the predefined threshold value, then the trial is considered to be successful. HR, hazard ratio; NSCLC, non–small-cell lung cancer; MoA, mechanism of action; OR, odds ratio; OS, overall survival; PD-1, programmed cell death 1; PD-L1, programmed cell death ligand 1; PFS, progression-free survival; PFS 4/6, progression-free survival at 4 and 6 months.

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