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. 2022 Apr 20:12:783682.
doi: 10.3389/fcimb.2022.783682. eCollection 2022.

Standards for Collection, Preservation, and Transportation of Fecal Samples in TCM Clinical Trials

Affiliations

Standards for Collection, Preservation, and Transportation of Fecal Samples in TCM Clinical Trials

Wenquan Su et al. Front Cell Infect Microbiol. .

Abstract

Background: Unlike chemical drugs with a single or a few kinds of active compounds, traditional Chinese medicines (TCMs)uses herbal formulas composed of numerous kinds of chemical constituents. Therefore, TCM clinical trials require unique and stricter standards for collecting, preserving, and transporting fecal samples than those used for chemical drugs. Unfortunately, there are no special standards for processing fecal samples in TCM clinical trials.

Methods: We invited interdisciplinary experts within TCM clinical trials and gut microbiome research to help formulate this standard. After more than a year's in-depth discussion and amendments, we achieved a standard via expert interviews, literature research, questionnaire surveys, and public opinion solicitation. This standard has been reviewed and approved by the Standards Office of China of the Association of Chinese medicine.

Results: We established a sample information processing method prior to TCM clinical sample collection, which is adapted to the unique features of TCM. The method formulates detailed processing requirements for TCM information in addition to the factors that may disturb the gut microbiome. We also constructed a set of methods for collecting, preserving, and transporting fecal samples that meet the characteristics of TCM. These methods formulate detailed operating specifications on the collection approaches, storage conditions, transportation requirements, and management of fecal samples.

Conclusions: This standard guides the information processing prior to sample collection and the standard operating procedures for the collection, preservation, and transportation of fecal samples in TCM clinical trials, which also can be used as a reference by clinicians and researchers in modern medicines.

Keywords: clinical trial; fecal sample collection; fecal sample processing; gut microbiome; standard; traditional Chinese medicine (TCM).

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Conflict of interest statement

Author BZ was employed by Beijing QuantiHealth Technology Co, Ltd. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Figures

Figure 1
Figure 1
Flowchart for the development of Standards for collection, preservation, and transportation of fecal samples in TCM clinical trials.

References

    1. Allegretti J. R., Mullish B. H., Kelly C., Fischer M. (2019). The Evolution of the Use of Faecal Microbiota Transplantation and Emerging Therapeutic Indications. Lancet (Lond Engl) 394 (10196), 420–431. doi: 10.1016/S0140-6736(19)31266-8 - DOI - PubMed
    1. Allen J. M., Mailing L. J., Niemiro G. M., Moore R., Cook M. D., White B. A., et al. (2018). Exercise Alters Gut Microbiota Composition and Function in Lean and Obese Humans. Med. Sci. Sports Exercise 50 (4), 747–757. doi: 10.1249/MSS.0000000000001495 - DOI - PubMed
    1. Amos G., Logan A., Anwar S., Fritzsche M., Mate R., Bleazard T., et al. (2020). Developing Standards for the Microbiome Field. Microbiome 8 (1), 98. doi: 10.1186/s40168-020-00856-3 - DOI - PMC - PubMed
    1. Angelakis E., Bachar D., Henrissat B., Armougom F., Audoly G., Lagier J. C., et al. (2016). Glycans Affect DNA Extraction and Induce Substantial Differences in Gut Metagenomic Studies. Sci. Rep. 6, 26276. doi: 10.1038/srep26276 - DOI - PMC - PubMed
    1. Bahl M. I., Bergström A., Licht T. R. (2012). Freezing Fecal Samples Prior to DNA Extraction Affects the Firmicutes to Bacteroidetes Ratio Determined by Downstream Quantitative PCR Analysis. FEMS Microbiol. Lett. 329 (2), 193–197. doi: 10.1111/j.1574-6968.2012.02523.x - DOI - PubMed

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