New adventures in spatial transcriptomics

Maayan Pour¹, Itai Yanai²

Affiliations

¹ Institute for Computational Medicine, NYU School of Medicine, New York, NY 10016, USA.
² Institute for Computational Medicine, NYU School of Medicine, New York, NY 10016, USA. Electronic address: itai.yanai@nyulangone.org.

PMID: 35609527
DOI: 10.1016/j.devcel.2022.04.021

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New adventures in spatial transcriptomics

Maayan Pour et al. Dev Cell. 2022.

Free article

. 2022 May 23;57(10):1209-1210.

doi: 10.1016/j.devcel.2022.04.021.

Authors

Maayan Pour¹, Itai Yanai²

Affiliations

¹ Institute for Computational Medicine, NYU School of Medicine, New York, NY 10016, USA.
² Institute for Computational Medicine, NYU School of Medicine, New York, NY 10016, USA. Electronic address: itai.yanai@nyulangone.org.

PMID: 35609527
DOI: 10.1016/j.devcel.2022.04.021

Abstract

Complex dynamic processes such as development involve the deployment of gene regulatory pathways that transform the spatial arrangement of cells. Disentangling these genetic programs is at the core of many biological problems. Stereo-seq is a promising spatial transcriptomics method, as demonstrated by three papers in this issue of Developmental Cell, each in a distinct biological context.

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Conflict of interest statement

Declaration of interests The authors declare no competing interests.

Comment on

High-resolution 3D spatiotemporal transcriptomic maps of developing Drosophila embryos and larvae.
Wang M, Hu Q, Lv T, Wang Y, Lan Q, Xiang R, Tu Z, Wei Y, Han K, Shi C, Guo J, Liu C, Yang T, Du W, An Y, Cheng M, Xu J, Lu H, Li W, Zhang S, Chen A, Chen W, Li Y, Wang X, Xu X, Hu Y, Liu L. Wang M, et al. Dev Cell. 2022 May 23;57(10):1271-1283.e4. doi: 10.1016/j.devcel.2022.04.006. Epub 2022 May 4. Dev Cell. 2022. PMID: 35512700
Spatiotemporal mapping of gene expression landscapes and developmental trajectories during zebrafish embryogenesis.
Liu C, Li R, Li Y, Lin X, Zhao K, Liu Q, Wang S, Yang X, Shi X, Ma Y, Pei C, Wang H, Bao W, Hui J, Yang T, Xu Z, Lai T, Berberoglu MA, Sahu SK, Esteban MA, Ma K, Fan G, Li Y, Liu S, Chen A, Xu X, Dong Z, Liu L. Liu C, et al. Dev Cell. 2022 May 23;57(10):1284-1298.e5. doi: 10.1016/j.devcel.2022.04.009. Epub 2022 May 4. Dev Cell. 2022. PMID: 35512701
The single-cell stereo-seq reveals region-specific cell subtypes and transcriptome profiling in Arabidopsis leaves.
Xia K, Sun HX, Li J, Li J, Zhao Y, Chen L, Qin C, Chen R, Chen Z, Liu G, Yin R, Mu B, Wang X, Xu M, Li X, Yuan P, Qiao Y, Hao S, Wang J, Xie Q, Xu J, Liu S, Li Y, Chen A, Liu L, Yin Y, Yang H, Wang J, Gu Y, Xu X. Xia K, et al. Dev Cell. 2022 May 23;57(10):1299-1310.e4. doi: 10.1016/j.devcel.2022.04.011. Epub 2022 May 4. Dev Cell. 2022. PMID: 35512702

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New adventures in spatial transcriptomics

Affiliations

New adventures in spatial transcriptomics

Authors

Affiliations

Abstract

Conflict of interest statement

Comment on

Publication types

MeSH terms

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