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. 2022 Jul 14;65(13):8998-9010.
doi: 10.1021/acs.jmedchem.2c00205. Epub 2022 Jun 30.

Innovative Non-PrP-Targeted Drug Strategy Designed to Enhance Prion Clearance

Affiliations

Innovative Non-PrP-Targeted Drug Strategy Designed to Enhance Prion Clearance

Arianna Colini Baldeschi et al. J Med Chem. .

Abstract

Prion diseases are a group of neurodegenerative disorders characterized by the accumulation of misfolded prion protein (called PrPSc). Although conversion of the cellular prion protein (PrPC) to PrPSc is still not completely understood, most of the therapies developed until now are based on blocking this process. Here, we propose a new drug strategy aimed at clearing prions without any direct interaction with neither PrPC nor PrPSc. Starting from the recent discovery of SERPINA3/SerpinA3n upregulation during prion diseases, we have identified a small molecule, named compound 5 (ARN1468), inhibiting the function of these serpins and effectively reducing prion load in chronically infected cells. Although the low bioavailability of this compound does not allow in vivo studies in prion-infected mice, our strategy emerges as a novel and effective approach to the treatment of prion disease.

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Conflict of interest statement

The authors declare no competing financial interest.

Figures

Figure 1
Figure 1
Chemical structures of compounds A–U.
Figure 2
Figure 2
Chemical structures of compounds 1–8.
Figure 3
Figure 3
Anti-prion effect of anti-SERPINA3 hit compounds in ScGT1 RML cell lines. (A,C) Representative Western blot image of PrPSc, total PrP, and β-actin in lysates from ScGT1 RML treated with vehicle (CTRL) or compounds G and H at 40 μM, or compound 5 (ARN1468) at 20 μM. Molecular weight markers are represented on the right (kDa). (B,D) Densitometric analysis of normalized PrPSc levels in ScGT1 RML treated with the vehicle or the drug. Experiments have been performed in triples (n = 6). Statistical significance was assessed using Friedman test and Dunn’s multiple comparison compared to control cells (B) or Wilcoxon matched-pair signed rank test (D) *p < 0.05.
Figure 4
Figure 4
Anti-prion effect of compound 5 in ScGT1 22L, ScN2a RML, and ScN2a 22L cell lines. (A–C) Representative Western blot images of PrPSc, total PrP, and β-actin in lysates from ScGT1 22L (A), ScN2a RML (B), and ScN2a 22L (C) treated with vehicle (CTRL) or compound 5 at 20 μM. Molecular weight markers are shown on the right (kDa). (D–F) Densitometric analysis of normalized PrPSc levels in ScGT1 22L (D), ScN2a RML (E), and ScN2a 22L (F) treated with the vehicle or the drug. Experiments have been performed in six times (n = 6). Statistical significance was assessed by Wilcoxon matched pairs signed rank test, *p < 0.05.
Figure 5
Figure 5
Dose–response curve of compound 5 on RML- and 22L-infected GT1 and N2a cell lines. Densitometric analysis of PrPSc level clearance after 3 days treatment with compound 5 in ScGT1 RML (A, EC50 = 8.64), ScGT1 22L (B, EC50 = 19.3), ScN2a RML (C, EC50 = 11.2), and ScN2a 22L (D, EC50 = 6.27) (for all titrations, n = 3).
Figure 6
Figure 6
Chronic treatment of prion-infected GT1 and N2a cell line with compound 5. Western blot analysis of PrPSc in lysates from ScGT1 RML (A), ScN2a RML (B), ScGT1 22L (C), and ScN2a 22L (D) treated with vehicle or compound 5 at 20 μM for four passages (up to 1 month). β-actin was used as a loading control. Molecular weight markers are shown on the right of each Western blot (kDa).
Figure 7
Figure 7
Compound 5 and quinacrine treatment of ScN2a RML cells. (A,B) Representative Western blot images of PrPSc, total PrP, and β-actin in lysates from ScN2a RML cells treated with (A) vehicles, quinacrine (1 μM), or compound 5 (10 μM) and (B) vehicles or a dose gradient of compound 5 and quinacrine (2–10 μM and 0.2–1 μM, respectively). (C) Pairwise dose–response data (left) and isobologram synergy plot (right) were presented for the combination treatment. Dose–response data are derived from a nonlinear regression of 3 experimental replicates, plotted with mean ± SD. The diagonal line of the isobologram represents the additive line. EC50,add dot corresponds to the calculated, theoretical paired value, when assuming an additive interaction between the two drugs. EC50,mix represents the paired value of drug concentrations assessed or synergism. The interaction index (γ) was calculated, and it corresponds to a value of 0.19.
Figure 8
Figure 8
Pharmacokinetic profile of compound 5 in vivo. The pharmacokinetic profiles of compound 5 in plasma following intravenous (I.V.) and oral (P.O.) administration to male C57BL/6 mice (n = 3 per time point).

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