Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2022 Jun 30;10(3):38.
doi: 10.3390/diseases10030038.

Predicting the Spread of SARS-CoV-2 in Italian Regions: The Calabria Case Study, February 2020-March 2022

Affiliations

Predicting the Spread of SARS-CoV-2 in Italian Regions: The Calabria Case Study, February 2020-March 2022

Francesco Branda et al. Diseases. .

Abstract

Despite the stunning speed with which highly effective and safe vaccines have been developed, the emergence of new variants of SARS-CoV-2 causes high rates of (re)infection, a major impact on health care services, and a slowdown to the socio-economic system. For COVID-19, accurate and timely forecasts are therefore essential to provide the opportunity to rapidly identify risk areas affected by the pandemic, reallocate the use of health resources, design countermeasures, and increase public awareness. This paper presents the design and implementation of an approach based on autoregressive models to reliably forecast the spread of COVID-19 in Italian regions. Starting from the database of the Italian Civil Protection Department (DPC), the experimental evaluation was performed on real-world data collected from February 2020 to March 2022, focusing on Calabria, a region of Southern Italy. This evaluation shows that the proposed approach achieves a good predictive power for out-of-sample predictions within one week (R-squared > 0.9 at 1 day, R-squared > 0.7 at 7 days), although it decreases with increasing forecasted days (R-squared > 0.5 at 14 days).

Keywords: COVID-19; Calabria; Italy; SARIMA; SARS-CoV-2; epidemiology; forecasting; time series regression models.

PubMed Disclaimer

Conflict of interest statement

The authors declare no conflict of interest.

Figures

Figure 1
Figure 1
Proposed approach steps.
Figure 2
Figure 2
Workflow of the predictive modeling step.
Figure 3
Figure 3
SARIMA model diagnostics.
Figure 4
Figure 4
Calabria epidemiological data: (A) new positive cases; (B) total amount of deaths; (C) hospitalized patients with symptoms and (D) in intensive care.
Figure 5
Figure 5
COVID-19 estimated Rt in Calabria over a 7-day moving average, 24 February 2020–27 March 2022.
Figure 6
Figure 6
Data tests: (A) Box–Cox transformed data; (B) Box–Cox transformed and differentiated data.
Figure 7
Figure 7
Out-of-sample 14-days prediction of daily new COVID-19 cases in Calabria with SARIMA model.
Figure 8
Figure 8
Pooled R2 scores of the 14-days out-of-sample forecast of COVID-19 new daily cases in Calabria (Italy) with SARIMA model.

References

    1. Pneumonia of Unknown Cause—China. [(accessed on 22 March 2022)]. Available online: https://www.who.int/csr/don/05-january-2020-pneumonia-of-unkown-cause-ch...
    1. Listings of WHO’s Response to COVID-19. [(accessed on 20 March 2022)]. Available online: https://www.who.int/news-room/detail/29-06-2020-covidtimeline.
    1. Tracking SARS-CoV-2 Variants. [(accessed on 20 March 2022)]. Available online: https://www.who.int/en/activities/tracking-SARS-CoV-2-variants/
    1. Update on Omicron. [(accessed on 20 March 2022)]. Available online: https://www.who.int/news/item/28-11-2021-update-on-omicron.
    1. Statement on Omicron Sublineage, BA.2. [(accessed on 20 March 2022)]. Available online: https://www.who.int/news/item/22-02-2022-statement-on-omicron-sublineage....

LinkOut - more resources