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. 2022 Sep 30;38(19):4645-4646.
doi: 10.1093/bioinformatics/btac573.

YAMACS: a graphical interface for GROMACS

Arkadeep Sarkar  1 , Jacopo Santoro  1 , Luigi Di Biasi  2 , Francesco Marrafino  1 , Stefano Piotto  1   3
Affiliations

YAMACS: a graphical interface for GROMACS

Arkadeep Sarkar et al. Bioinformatics. .

Abstract

Summary: A graphical user interface for the GROMACS program has been developed as plugins for YASARA molecular graphics suite. The most significant GROMACS methods can be run entirely via a windowed menu system, and the results are shown on screen in real time.

Availability and implementation: YAMACS is written in Python and is freely available for download at https://github.com/YAMACS-SML/YAMACS and is supported on Linux. It has been released under GPL-3.0 license.

Supplementary information: Supplementary data are available at Bioinformatics online.

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