Two-CyDye-Based 2D-DIGE Analysis of Aged Human Muscle Biopsy Specimens
- PMID: 36378445
- DOI: 10.1007/978-1-0716-2831-7_19
Two-CyDye-Based 2D-DIGE Analysis of Aged Human Muscle Biopsy Specimens
Abstract
The gradual loss of skeletal muscle mass during aging and associated decline in contractile strength can result in reduced fitness, frailty, and loss of independence. In order to better understand the molecular and cellular mechanisms that underlie sarcopenia of old age and the frailty syndrome, as well as identify novel therapeutic targets to treat age-related fiber wasting, it is crucial to develop a comprehensive biomarker signature of muscle aging. Fluorescence two-dimensional gel electrophoresis (2D-DIGE) in combination with sensitive mass spectrometry presents an ideal bioanalytical tool for biomarker discovery in biogerontology. This chapter outlines the application of the 2D-DIGE method for the comparative analysis of human biopsy specimens from middle-aged versus senescent individuals using a two-CyDye-based method.
Keywords: Aging; DIGE; Difference gel electrophoresis; Mass spectrometry; Sarcopenia; Senescence; Skeletal muscle; Two-dimensional gel electrophoresis.
© 2023. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.
Similar articles
-
Comparative 3-Sample 2D-DIGE Analysis of Skeletal Muscles.Methods Mol Biol. 2023;2596:127-146. doi: 10.1007/978-1-0716-2831-7_11. Methods Mol Biol. 2023. PMID: 36378437
-
Cancer biomarker development and two-dimensional difference gel electrophoresis (2D-DIGE).Biochim Biophys Acta Proteins Proteom. 2019 Jan;1867(1):2-8. doi: 10.1016/j.bbapap.2018.07.002. Epub 2018 Jul 7. Biochim Biophys Acta Proteins Proteom. 2019. PMID: 30392560 Review.
-
Identification of Subproteomic Markers for Skeletal Muscle Profiling.Methods Mol Biol. 2023;2596:291-302. doi: 10.1007/978-1-0716-2831-7_20. Methods Mol Biol. 2023. PMID: 36378446
-
DIGE-Based Biomarker Discovery in Blood Cancers.Methods Mol Biol. 2023;2596:105-112. doi: 10.1007/978-1-0716-2831-7_8. Methods Mol Biol. 2023. PMID: 36378434
-
Comparative DIGE Proteomics.Methods Mol Biol. 2018;1664:17-24. doi: 10.1007/978-1-4939-7268-5_2. Methods Mol Biol. 2018. PMID: 29019121 Review.
Cited by
-
Proteomic reference map for sarcopenia research: mass spectrometric identification of key muscle proteins of organelles, cellular signaling, bioenergetic metabolism and molecular chaperoning.Eur J Transl Myol. 2024 May 24;34(2):12565. doi: 10.4081/ejtm.2024.12565. Eur J Transl Myol. 2024. PMID: 38787292 Free PMC article.
-
Proteomic reference map for sarcopenia research: mass spectrometric identification of key muscle proteins located in the sarcomere, cytoskeleton and the extracellular matrix.Eur J Transl Myol. 2024 May 24;34(2):12564. doi: 10.4081/ejtm.2024.12564. Eur J Transl Myol. 2024. PMID: 38787300 Free PMC article.
-
Five Padua days on muscle and mobility medicine (2024Pdm3) 27 February - 2 March, 2024 at Hotel Petrarca, Thermae of Euganean Hills, Padua, and San Luca Hall, Prato della Valle, Padua, Italy.Eur J Transl Myol. 2023 Dec 18;33(4):12161. doi: 10.4081/ejtm.2023.12161. Eur J Transl Myol. 2023. PMID: 38112609 Free PMC article.
-
Fiber-Type Shifting in Sarcopenia of Old Age: Proteomic Profiling of the Contractile Apparatus of Skeletal Muscles.Int J Mol Sci. 2023 Jan 26;24(3):2415. doi: 10.3390/ijms24032415. Int J Mol Sci. 2023. PMID: 36768735 Free PMC article. Review.
-
Mass Spectrometry-Based Proteomic Technology and Its Application to Study Skeletal Muscle Cell Biology.Cells. 2023 Nov 1;12(21):2560. doi: 10.3390/cells12212560. Cells. 2023. PMID: 37947638 Free PMC article. Review.
References
-
- Partridge L, Deelen J, Slagboom PE (2018) Facing up to the global challenges of ageing. Nature 561:45–56 - PubMed
-
- Melzer D, Pilling LC, Ferrucci L (2021) The genetics of human ageing. Nat Rev Genet 21:88–101
-
- Aunan JR, Watson MM, Hagland HR, Søreide K (2016) Molecular and biological hallmarks of ageing. Br J Surg 103:e29–e46 - PubMed
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources