Author Correction: Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative

Ruth Johnson^{1

2}, Yi Ding^{3

4}, Vidhya Venkateswaran^{3

5}, Arjun Bhattacharya^{3

6}, Kristin Boulier^{4

7}, Alec Chiu⁴, Sergey Knyazev^{3

6}, Tommer Schwarz^{3

4}, Malika Freund^{8

9}, Lingyu Zhan¹⁰, Kathryn S Burch^{3

4}, Christa Caggiano^{3

11}, Brian Hill¹², Nadav Rakocz¹², Brunilda Balliu¹³, Christopher T Denny^{14

15

16}, Jae Hoon Sul¹⁷, Noah Zaitlen^{11

13}, Valerie A Arboleda^{3

8

13}, Eran Halperin^{12

13

18}, Sriram Sankararaman^{12

8

13}, Manish J Butte¹⁹; UCLA Precision Health Data Discovery Repository Working Group, UCLA Precision Health ATLAS Working Group; Clara Lajonchere^{11

20}, Daniel H Geschwind^{8

11

20}, Bogdan Pasaniuc^{21

22

23

24

25}

Affiliations

¹ Department of Computer Science, University of California, Los Angeles, Los Angeles, CA, 90095, USA. ruthjohnson@g.ucla.edu.
² Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA. ruthjohnson@g.ucla.edu.
³ Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁴ Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁵ Department of Oral Biology, School of Dentistry, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁶ Institute for Quantitative and Computational Biosciences, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁷ Department of Medicine, Division of Cardiology, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁸ Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁹ Department of Genetics, Stanford School of Medicine, Stanford, CA, 94305, USA.
¹⁰ Molecular Biology Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹¹ Program in Neurogenetics, Department of Neurology, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹² Department of Computer Science, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹³ Department of Computational Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁴ Division of Hematology/Oncology, Department of Pediatrics, Gwynne Hazen Cherry Memorial Laboratories, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁵ Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁶ Jonsson Comprehensive Cancer Center, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁷ Department of Psychiatry and Biobehavioral Sciences, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁸ Department of Anesthesiology and Perioperative Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁹ Department of Pediatrics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
²⁰ Institute of Precision Health, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
²¹ Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.
²² Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.
²³ Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.
²⁴ Department of Computational Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.
²⁵ Institute of Precision Health, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.

PMID: 36384576
PMCID: PMC9670414
DOI: 10.1186/s13073-022-01128-5

Published Erratum

Author Correction: Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative

Ruth Johnson et al. Genome Med. 2022.

. 2022 Nov 16;14(1):128.

doi: 10.1186/s13073-022-01128-5.

Authors

Affiliations

¹ Department of Computer Science, University of California, Los Angeles, Los Angeles, CA, 90095, USA. ruthjohnson@g.ucla.edu.
² Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA. ruthjohnson@g.ucla.edu.
³ Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁴ Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁵ Department of Oral Biology, School of Dentistry, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁶ Institute for Quantitative and Computational Biosciences, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁷ Department of Medicine, Division of Cardiology, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁸ Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
⁹ Department of Genetics, Stanford School of Medicine, Stanford, CA, 94305, USA.
¹⁰ Molecular Biology Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹¹ Program in Neurogenetics, Department of Neurology, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹² Department of Computer Science, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹³ Department of Computational Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁴ Division of Hematology/Oncology, Department of Pediatrics, Gwynne Hazen Cherry Memorial Laboratories, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁵ Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁶ Jonsson Comprehensive Cancer Center, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁷ Department of Psychiatry and Biobehavioral Sciences, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁸ Department of Anesthesiology and Perioperative Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
¹⁹ Department of Pediatrics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
²⁰ Institute of Precision Health, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
²¹ Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.
²² Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.
²³ Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.
²⁴ Department of Computational Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.
²⁵ Institute of Precision Health, University of California, Los Angeles, Los Angeles, CA, 90095, USA. pasaniuc@g.ucla.edu.

PMID: 36384576
PMCID: PMC9670414
DOI: 10.1186/s13073-022-01128-5

No abstract available

PubMed Disclaimer

Figures

**Fig. 2**
Global PCA reflects self-identified race/ethnicity and language of ATLAS participants. A Genetic PCs 1 and 2 of individuals in ATLAS (N=36,736) shaded by continental GIA as inferred from 1000 Genomes. B, C The first two genetic PCs of the ATLAS participants shaded by SIRE and preferred language, respectively. To improve visualization in C, only languages with >10 responses were assigned a color

**Fig. 5**
Disease associations vary across continental genetically inferred ancestry groups in ATLAS. We show the odds ratio computed from associating each phenotype with individuals’ genetically inferred ancestry in ATLAS (N=36,736) under a logistic regression model. Error bars represent 95% confidence intervals

See this image and copyright information in PMC

Erratum for

Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative.
Johnson R, Ding Y, Venkateswaran V, Bhattacharya A, Boulier K, Chiu A, Knyazev S, Schwarz T, Freund M, Zhan L, Burch KS, Caggiano C, Hill B, Rakocz N, Balliu B, Denny CT, Sul JH, Zaitlen N, Arboleda VA, Halperin E, Sankararaman S, Butte MJ; UCLA Precision Health Data Discovery Repository Working Group, UCLA Precision Health ATLAS Working Group; Lajonchere C, Geschwind DH, Pasaniuc B. Johnson R, et al. Genome Med. 2022 Sep 9;14(1):104. doi: 10.1186/s13073-022-01106-x. Genome Med. 2022. PMID: 36085083 Free PMC article.

References

1. Johnson R, et al. Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative. Genome Med. 2022;14:104. doi: 10.1186/s13073-022-01106-x. - DOI - PMC - PubMed

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Author Correction: Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative

Affiliations

Author Correction: Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative

Authors

Affiliations

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Erratum for

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