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[Preprint]. 2023 Jan 4:2023.01.03.522673.
doi: 10.1101/2023.01.03.522673.

IsoAnalytics: A Single-cell Proteomics Web Server

Suzette N Palmer, Andrew Y Koh, Xiaowei Zhan

IsoAnalytics: A Single-cell Proteomics Web Server

Suzette N Palmer et al. bioRxiv. .

Update in

Abstract

Motivation: Single-cell proteomics provide unprecedented resolution to examine biological processes. Customized data analysis and facile data visualization are crucial for scientific discovery. Further, userfriendly data analysis and visualization software that is easily accessible for the general scientific community is essential.

Results: We have created a web server, IsoAnalytics , that gives users without computational or bioinformatics background the ability to directly analyze and interactively visualize data obtained from the Isoplexis single cell technology platform. We envision this open-sourced web server will increase research productivity and serve as a free, competitive alternative for single-cell proteomics research.

Contact: Andrew.Koh@utsouthwestern.edu and Xiaowei.Zhan@utsouthwestern.edu.

Availability: IsoAnalytics is free and available at: https://cdc.biohpc.swmed.edu/isoplexis/ and is implemented in Python, with all major browsers supported. Code for IsoAnalytics is free and available at: https://github.com/zhanxw/Isoplexis_Data_Analysis .

Supplementary information: Supplementary data are available at Bioinformatics online.

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