Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2023 Mar 16;12(3):e0126522.
doi: 10.1128/mra.01265-22. Epub 2023 Feb 22.

Draft Genome Sequence of Lactococcus lactis Strain 12-16-PSH, Isolated from Prostokvasha from the Arkhangelsk Region of Russia

Alexander G Elcheninov  1 , Kseniya S Zayulina  1 , Polina A Shcherbakova  2 , Mariia K Kremneva  2 , Liliya A Gavirova  2 , Andrey I Shestakov  2 , Ilya V Kublanov  1   2
Affiliations

Draft Genome Sequence of Lactococcus lactis Strain 12-16-PSH, Isolated from Prostokvasha from the Arkhangelsk Region of Russia

Alexander G Elcheninov et al. Microbiol Resour Announc. .

Abstract

A draft genome sequence of Lactococcus lactis strain 12-16-PSH, which was isolated from prostokvasha, is reported. The genome assembly of strain 12-16-PSH contained 63 contigs, with a total length of 2,468,647 bp. A total of 2,421 protein-coding genes were predicted, among which 6 encoded bacteriocins while 15 encoded glycosyl transferases, presumably involved in exopolysaccharide biosynthesis.

PubMed Disclaimer

Conflict of interest statement

The authors declare no conflict of interest.

References

    1. De Filippis F, Pasolli E, Ercolini D. 2020. The food-gut axis: lactic acid bacteria and their link to food, the gut microbiome and human health. FEMS Microbiol Rev 44:454–489. doi: 10.1093/femsre/fuaa015. - DOI - PMC - PubMed
    1. Kochetkova TV, Grabarnik IP, Klyukina AA, Zayulina KS, Elizarov IM, Shestakova OO, Gavirova LA, Malysheva AD, Shcherbakova PA, Barkhutova DD, Karnachuk OV, Shestakov AI, Elcheninov AG, Kublanov IV. 2022. Microbial communities of artisanal fermented milk products from Russia. Microorganisms 10:2140. doi: 10.3390/microorganisms10112140. - DOI - PMC - PubMed
    1. Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, Pyshkin AV, Sirotkin AV, Vyahhi N, Tesler G, Alekseyev MA, Pevzner PA. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol 19:455–477. doi: 10.1089/cmb.2012.0021. - DOI - PMC - PubMed
    1. Wick RR, Judd LM, Gorrie CL, Holt KE. 2017. Unicycler: resolving bacterial genome assemblies from short and long sequencing reads. PLoS Comput Biol 13:e1005595. doi: 10.1371/journal.pcbi.1005595. - DOI - PMC - PubMed
    1. Gurevich A, Saveliev V, Vyahhi N, Tesler G. 2013. QUAST: quality assessment tool for genome assemblies. Bioinformatics 29:1072–1075. doi: 10.1093/bioinformatics/btt086. - DOI - PMC - PubMed

LinkOut - more resources