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. 2023 Feb 18;15(1):75-88.
doi: 10.1007/s12551-023-01047-8. eCollection 2023 Feb.

Gobind's last graduate student

Affiliations

Gobind's last graduate student

Judith Klein-Seetharaman. Biophys Rev. .

Abstract

Written on the occasion of his 100th birthday, this is a personal account of my time as a graduate student with Nobel laureate, H. Gobind Khorana, at the Massachusetts Institute of Technology from 1996 to 2000.

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Conflict of interest statement

Conflict of interestNot applicable.

Figures

Fig. 1
Fig. 1
Birthday note. (Photograph used with permission of the owner, Judith Klein-Seetharaman)
Fig. 2
Fig. 2
Gobind and Esther: a family away from home. A Fax sent to me in Germany planning my arrival at MIT. B Note on letter head. C Note regarding my mother’s visit at MIT. (Photographs used with permission of the owner, Judith Klein-Seetharaman)
Fig. 3
Fig. 3
The Khorana lab at the time I was in his lab. A The Khorana lab sometime after I joined in 1995 in front of our lab poster. Top row, from left to right: E. Getmanova, J. Klein, Y. Itoh, H.G. Khorana, P.J. Reeves, J. Kim, L. Niu. Bottom row, from left to right: J. Hwa, K. Cai, M. Lowen. B The lab poster from A during its preparation phase. Outline and note from Gobind. C The annual group picture of the combined Khorana and RajBhandary labs in July 1997. Front row: P. Reeves, A. McInnis, U.L. RajBhandary, A. Kowal, K. Cai, H.G. Khorana, J. Carlin, U. Varshney, H.J. Drabkin, Y. Li. Back row: R. Vaidyanathan, K. Cha, C. Bruel, J. Klein, H-J. Park, S. Gite, J. Kim, J. Hwa. (Photographs used with permission of the owner, Judith Klein-Seetharaman)
Fig. 4
Fig. 4
A box of donuts appeared every Saturday in the computer room at the lab. Shown is here how I think a classical donut box looked like in Gobind’s brain. More pictures of the people depicted here are also shown in Fig. 3A, C
Fig. 5
Fig. 5
Primary means of communication: in-person meetings and notes. Shown here are some of Gobind’s hand-written notes or typed up notes via Judy Carlin. A Regular note. B Yellow sticky note. C Paper napkin note. D Typed up note. (Photographs used with permission of the owner, Judith Klein-Seetharaman)
Fig. 6
Fig. 6
More notes. A Small paper note. B Paper napkin, taped to my lab bench with purple tape found on my bench. (Photographs used with permission of the owner, Judith Klein-Seetharaman)
Fig. 7
Fig. 7
Faxes from Japan. A Fax from Japan on 10/16/1998. B Slide referenced in the joke from A. C Fax from Japan on 10/19/1998. D Fax from Japan on 10/21/1998. (Photographs used with permission of the owner, Judith Klein-Seetharaman)
Fig. 8
Fig. 8
The paper writing process. A Step 1: a note. B Step 2: an outline. C Steps 3-n: multiple rounds of revisions. (Photographs used with permission of the owner, Judith Klein-Seetharaman)
Fig. 9
Fig. 9
Bleaching and seemingly recovery of chromophore by absorbance spectroscopy. (Photograph used with permission of the owner, Judith Klein-Seetharaman)
Fig. 10
Fig. 10
Gobind’s legacy: rhodopsin research in my lab continues. A Homology models of coral opsin candidates (Kumar et al. 2023). B Experimental setup in my lab with spectroscopy setup (left), biochemical preparation (center) and coral tank (right). (Photograph used with permission of the owner, Judith Klein-Seetharaman)

References

    1. Allen B, Kotchey G, Chen Y, Yanamala N, Klein-Seetharaman J, Kagan V, Star A. Mechanistic investigations of horseradish peroxidase-catalyzed degradation of single-walled carbon nanotubes. J Am Chem Soc. 2009;131(47):17194–17205. doi: 10.1021/ja9083623. - DOI - PubMed
    1. Andón FT, Kapralov AA, Yanamala N, Feng W, Baygan A, Chambers BJ, Hultenby K, Ye F, Toprak MS, Brandner BD, Fornara A, Klein-Seetharaman J, Kotchey GP, Star A, Shvedova AA, Fadeel B, Kagan VE. Carbon nanotubes: biodegradation of single-walled carbon nanotubes by eosinophil peroxidase (Small 16/2013) Small. 2013;9:2720. doi: 10.1002/smll.201370096. - DOI - PMC - PubMed
    1. Barber J, De Las Rivas J. A functional model for the role of cytochrome b559 in the protection against donor and acceptor side photoinhibition. PNAS. 1993;90:10942–10946. doi: 10.1073/pnas.90.23.10942. - DOI - PMC - PubMed
    1. De Las Rivas J, Klein J, Barber J. pH sensitivity of the redox state of cytochrome b559 may regulate its function as a protectant against donor and acceptor side photoinhibition. Photosynth Res. 1995;46:193–202. doi: 10.1007/BF00020430. - DOI - PubMed
    1. Ganapathiraju M, Klein-Seetharaman J, Balakrishnan B, Reddy R. Characterization of protein secondary structure using latent semantic analysis. IEEE Signal Process Mag. 2003;21:78–87. doi: 10.1109/MSP.2004.1296545. - DOI

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