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Comparative Study
. 1986 Jun 11;14(11):4673-82.
doi: 10.1093/nar/14.11.4673.

RNA 2 of tobacco rattle virus strain TCM encodes an unexpected gene

G C Angenent, H J Linthorst, A F van Belkum, B J Cornelissen, J F Bol
Free PMC article
Comparative Study

RNA 2 of tobacco rattle virus strain TCM encodes an unexpected gene

G C Angenent et al. Nucleic Acids Res. .
Free PMC article

Abstract

The sequence of the 3'-terminal 1210 nucleotides of RNA 1 and the complete sequence of 3389 nucleotides of RNA 2 of tobacco rattle virus (TRV) strain TCM has been deduced. The sequence of the 3'-terminal 1099 nucleotides of RNAs 1 and 2 was found to be identical. Thus the genome of this TRV strain is partially diploid, encoding a 16K protein in both RNA 1 and RNA 2. The sequence that is unique to RNA 2 contains two open reading frames: the coat protein cistron and a cistron for a 29.1K protein, which shows no homology with the RNA 1 encoded 28.8K protein. cDNA probes corresponding to these two open reading frames cross-hybridized to pea early-browning virus RNA 2, but not to RNA 2 of five other tobraviruses tested.

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