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. 2023 Jun 20;12(6):e0025323.
doi: 10.1128/mra.00253-23. Epub 2023 May 31.

Complete Genome Sequences of Subcluster C1 Mycobacteriophages Blackbrain, Cactojaque, Kboogie, Trinitium, and YoungMoneyMata

Affiliations

Complete Genome Sequences of Subcluster C1 Mycobacteriophages Blackbrain, Cactojaque, Kboogie, Trinitium, and YoungMoneyMata

Madison M Moore et al. Microbiol Resour Announc. .

Abstract

Five subcluster C1 mycobacteriophages, Blackbrain, Cactojaque, Kboogie, Trinitium, and YoungMoneyMata, were isolated from soil using the host Mycobacterium smegmatis mc2155. The genome sizes range from 154,512 to 156,223 bp. The largest genome encodes 237 predicted proteins, 34 tRNAs, and 1 transfer-messenger RNA (tmRNA).

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Conflict of interest statement

The authors declare no conflict of interest.

Figures

FIG 1
FIG 1
Excerpts of genome maps (7650bp to 14000bp (a) and 133,850bp to 141,000bp (b)) generated using Phamerator displaying areas of low nucleotide similarity in the genomes of phages Blackbrain, Cactojaque, Kboogie, Trinitium, and YoungMoneyMata (10). Violet shading on the maps indicates 100% nucleotide identity, while blue, yellow, and red indicate decreasing nucleotide identity and white signifies no nucleotide identity (10).

References

    1. Jordan TC, Burnett SH, Carson S, Caruso SM, Clase K, DeJong RJ, Dennehy JJ, Denver DR, Dunbar D, Elgin SCR, Findley AM, Gissendanner CR, Golebiewska UP, Guild N, Hartzog GA, Grillo WH, Hollowell GP, Hughes LE, Johnson A, King RA, Lewis LO, Li W, Rosenzweig F, Rubin MR, Saha MS, Sandoz J, Shaffer CD, Taylor B, Temple L, Vazquez E, Ware VC, Barker LP, Bradley KW, Jacobs-Sera D, Pope WH, Russell DA, Cresawn SG, Lopatto D, Bailey CP, Hatfull GF. 2014. A broadly implementable research course in phage discovery and genomics for first-year undergraduate students. mBio 5:e01051-13. doi:10.1128/mBio.01051-13. - DOI - PMC - PubMed
    1. Poxleitner M, Pope W, Jacobs-Sera D, Sivanathan V, Hatfull GF. 2018. Phage discovery guide. Howard Hughes Medical Institute, Chevy Chase, MD.
    1. London LY, Ayuk MA, Effiom D, Fashina F, Louis BJ, Tolsma SS, Allen AD, Dickson LA, Ghosh S, Gugssa A, Ullah H, Bassey GB, Fernando LM, Moore MM, Oliver JJ, Irabor EG, Roy SD, Quagraine BK, Smith M, Anderson WA, RobInson CJ, Howard University SEA-PHAGES Students . 2021. Complete genome sequences of mycobacteriophages Dallas and Jonghyun. Microbiol Resour Announc 10:e0030421. doi:10.1128/MRA.00304-21. - DOI - PMC - PubMed
    1. Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, Bemben LA, Berka J, Braverman MS, Chen YJ, Chen Z, Dewell SB, Du L, Fierro JM, Gomes XV, Godwin BC, He W, Helgesen S, Ho CH, Irzyk GP, Jando SC, Alenquer MLI, Jarvie TP, Jirage KB, Kim JB, Knight JR, Lanza JR, Leamon JH, Lefkowitz SM, Lei M, Li J, Lohman KL, Lu H, Makhijani VB, McDade KE, McKenna MP, Myers EW, Nickerson E, Nobile JR, Plant R, Puc BP, Ronan MT, Roth GT, Sarkis GJ, Simons JF, Simpson JW, Srinivasan M, Tartaro KR, Tomasz A, Vogt KA, Volkmer GA, et al.. 2005. Genome sequencing in microfabricated high-density picolitre reactors. Nature 437:376–380. doi:10.1038/nature03959. - DOI - PMC - PubMed
    1. Gordon D, Green P. 2013. Consed: a graphical editor for next-generation sequencing. Bioinformatics 29:2936–2937. doi:10.1093/bioinformatics/btt515. - DOI - PMC - PubMed

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