Use of Electronic Health Record Data for Drug Safety Signal Identification: A Scoping Review
- PMID: 37340238
- PMCID: PMC11635839
- DOI: 10.1007/s40264-023-01325-0
Use of Electronic Health Record Data for Drug Safety Signal Identification: A Scoping Review
Abstract
Introduction: Pharmacovigilance programs protect patient health and safety by identifying adverse event signals through postmarketing surveillance of claims data and spontaneous reports. Electronic health records (EHRs) provide new opportunities to address limitations of traditional approaches and promote discovery-oriented pharmacovigilance.
Methods: To evaluate the current state of EHR-based medication safety signal identification, we conducted a scoping literature review of studies aimed at identifying safety signals from routinely collected patient-level EHR data. We extracted information on study design, EHR data elements utilized, analytic methods employed, drugs and outcomes evaluated, and key statistical and data analysis choices.
Results: We identified 81 eligible studies. Disproportionality methods were the predominant analytic approach, followed by data mining and regression. Variability in study design makes direct comparisons difficult. Studies varied widely in terms of data, confounding adjustment, and statistical considerations.
Conclusion: Despite broad interest in utilizing EHRs for safety signal identification, current efforts fail to leverage the full breadth and depth of available data or to rigorously control for confounding. The development of best practices and application of common data models would promote the expansion of EHR-based pharmacovigilance.
© 2023. The Author(s), under exclusive licence to Springer Nature Switzerland AG.
Conflict of interest statement
Statements and Declarations
Figures



Similar articles
-
An innovative method to strengthen evidence for potential drug safety signals using Electronic Health Records.J Med Syst. 2024 May 16;48(1):51. doi: 10.1007/s10916-024-02070-2. J Med Syst. 2024. PMID: 38753223 Free PMC article.
-
Postmarketing safety surveillance : where does signal detection using electronic healthcare records fit into the big picture?Drug Saf. 2013 Mar;36(3):183-97. doi: 10.1007/s40264-013-0018-x. Drug Saf. 2013. PMID: 23377696 Review.
-
Useful Interplay Between Spontaneous ADR Reports and Electronic Healthcare Records in Signal Detection.Drug Saf. 2015 Dec;38(12):1201-10. doi: 10.1007/s40264-015-0341-5. Drug Saf. 2015. PMID: 26370104 Free PMC article.
-
Leveraging Natural Language Processing and Machine Learning Methods for Adverse Drug Event Detection in Electronic Health/Medical Records: A Scoping Review.Drug Saf. 2025 Apr;48(4):321-337. doi: 10.1007/s40264-024-01505-6. Epub 2025 Jan 9. Drug Saf. 2025. PMID: 39786481 Free PMC article.
-
A reference standard for evaluation of methods for drug safety signal detection using electronic healthcare record databases.Drug Saf. 2013 Jan;36(1):13-23. doi: 10.1007/s40264-012-0002-x. Drug Saf. 2013. PMID: 23315292
Cited by
-
Optimal Significance Levels and Sample Sizes for Signal Detection Methods Based on Non-constant Hazards.Drug Saf. 2024 Nov;47(11):1149-1156. doi: 10.1007/s40264-024-01460-2. Epub 2024 Jul 9. Drug Saf. 2024. PMID: 38982034 Free PMC article.
-
Pharmacovigilance - Technological Advancements, Recent Developments and Innovations.Curr Drug Saf. 2025;20(4):423-449. doi: 10.2174/0115748863356840250112181406. Curr Drug Saf. 2025. PMID: 39931995 Review.
-
An innovative method to strengthen evidence for potential drug safety signals using Electronic Health Records.J Med Syst. 2024 May 16;48(1):51. doi: 10.1007/s10916-024-02070-2. J Med Syst. 2024. PMID: 38753223 Free PMC article.
-
An open-source implementation of tree-based scan statistics.Pharmacoepidemiol Drug Saf. 2024 Mar;33(3):e5765. doi: 10.1002/pds.5765. Pharmacoepidemiol Drug Saf. 2024. PMID: 38453354 Free PMC article.
-
Label-Free Electrochemical Cell-Based Biosensor for Toxicity Assay of Water-Soluble Form of Phosphatidylcholine.Biomedicines. 2025 Apr 20;13(4):996. doi: 10.3390/biomedicines13040996. Biomedicines. 2025. PMID: 40299676 Free PMC article.
References
-
- World Health Organization. What is Pharmacovigilance? [Internet]. [cited 2022 Jul 22]. Available from: https://www.who.int/teams/regulation-prequalification/regulation-and-saf...
-
- Hauben M, Aronson JK. Defining “signal” and its subtypes in pharmacovigilance based on a systematic review of previous definitions. Drug Saf. 2009;32:99–110. - PubMed
-
- Coloma PM, Trifiro G, Patadia V, Sturkenboom M Postmarketing safety surveillance: Where does signal detection using electronic healthcare records fit into the big picture? Drug Saf. 2013;36:183–97. - PubMed
-
- U.S. Food & Drug Administration. Questions and Answers on FDA’s Adverse Event Reporting System (FAERS) [Internet]. 2018. Available from: https://www.fda.gov/drugs/surveillance/questions-and-answers-fdas-advers...
-
- European Medicines Agency. EudraVigilance system overview [Internet]. [cited 2022 Aug 25]. Available from: https://www.ema.europa.eu/en/human-regulatory/research-development/pharm...
Publication types
MeSH terms
Grants and funding
LinkOut - more resources
Full Text Sources