Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2023 Aug;239(4):1212-1224.
doi: 10.1111/nph.19060. Epub 2023 Jul 8.

Species phylogeny, ecology, and root traits as predictors of root exudate composition

Affiliations
Free article

Species phylogeny, ecology, and root traits as predictors of root exudate composition

Nikita Rathore et al. New Phytol. 2023 Aug.
Free article

Abstract

Root traits including root exudates are key factors affecting plant interactions with soil and thus play an important role in determining ecosystem processes. The drivers of their variation, however, remain poorly understood. We determined the relative importance of phylogeny and species ecology in determining root traits and analyzed the extent to which root exudate composition can be predicted by other root traits. We measured different root morphological and biochemical traits (including exudate profiles) of 65 plant species grown in a controlled system. We tested phylogenetic conservatism in traits and disentangled the individual and overlapping effects of phylogeny and species ecology on traits. We also predicted root exudate composition using other root traits. Phylogenetic signal differed greatly among root traits, with the strongest signal in phenol content in plant tissues. Interspecific variation in root traits was partly explained by species ecology, but phylogeny was more important in most cases. Species exudate composition could be partly predicted by specific root length, root dry matter content, root biomass, and root diameter, but a large part of variation remained unexplained. In conclusion, root exudation cannot be easily predicted based on other root traits and more comparative data on root exudation are needed to understand their diversity.

Keywords: metabolomics; phylogenetic conservatism; rhizosphere; root exudates; root traits.

PubMed Disclaimer

References

    1. Abouheif E. 1999. A method for testing the assumption of phylogenetic independence in comparative data. Evolutionary Ecology Research 1: 895-909.
    1. Ainsworth EA, Gillespie KM. 2007. Estimation of total phenolic content and other oxidation substrates in plant tissues using Folin-Ciocalteu reagent. Nature Protocols 2: 875-877.
    1. Aldorfová A, Knobová P, Münzbergová Z. 2020. Plant-soil feedback contributes to predicting plant invasiveness of 68 alien plant species differing in invasive status. Oikos 129: 1257-1270.
    1. Armitage EG, Godzien J, Alonso-Herranz V, López-Gonzálvez Á, Barbas C. 2015. Missing value imputation strategies for metabolomics data. Electrophoresis 36: 3050-3060.
    1. Badri DV, Chaparro JM, Zhang R, Shen Q, Vivanco JM. 2013. Application of natural blends of phytochemicals derived from the root exudates of Arabidopsis to the soil reveal that phenolic-related compounds predominantly modulate the soil microbiome. Journal of Biological Chemistry 288: 4502-4512.

Publication types

LinkOut - more resources