Grand challenges in bioinformatics education and training

Esra Büşra Işık^#^{1

2}, Michelle D Brazas^#^{3

4}, Russell Schwartz^#⁵, Bruno Gaeta⁶, Patricia M Palagi⁷, Celia W G van Gelder⁸, Prashanth Suravajhala^{9

10}, Harpreet Singh^{2

10

11}, Sarah L Morgan¹², Hilyatuz Zahroh^{2

13}, Maurice Ling^{2

14}, Venkata P Satagopam^{15

16}, Annette McGrath¹⁷, Kenta Nakai¹⁸, Tin Wee Tan^{19

20}, Ge Gao²¹, Nicola Mulder²², Christian Schönbach^#²³, Yun Zheng²⁴, Javier De Las Rivas²⁵, Asif M Khan^{26

27

28

29}

Affiliations

¹ Beykoz Institute of Life Sciences and Biotechnology, Bezmialem Vakif University, Istanbul, Turkey.
² APBioNET.org, Singapore, Singapore.
³ Ontario Institute for Cancer Research, Toronto, Ontario, Canada.
⁴ Bioinformatics.ca, Toronto, Ontario, Canada.
⁵ Carnegie Mellon University, Pittsburgh, PA, USA.
⁶ School of Computer Science and Engineering, University of New South Wales, Sydney, New South Wales, Australia.
⁷ Swiss Institute of Bioinformatics, Lausanne, Switzerland.
⁸ Dutch Techcentre for Life Sciences, Utrecht, the Netherlands.
⁹ Amrita School of Biotechnology, Amrita Vishwa Vidyapeetham, Clappana, India.
¹⁰ Bioclues.org, Hyderabad, India.
¹¹ Department of Bioinformatics, Hans Raj Mahila Maha Vidyalaya, Jalandhar, India.
¹² European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.
¹³ Genetics Research Centre, Universitas YARSI, Jakarta, Indonesia.
¹⁴ School of Applied Science, Temasek Polytechnic, Singapore, Singapore.
¹⁵ Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
¹⁶ International Society for Computational Biology, Leesburg, VA, USA.
¹⁷ CSIRO Data61, Brisbane, Queensland, Australia.
¹⁸ Institute of Medical Science, University of Tokyo, Tokyo, Japan.
¹⁹ Department of Biochemistry, YLL School of Medicine, National University of Singapore, Singapore, Singapore.
²⁰ National Supercomputing Centre, Singapore, Singapore.
²¹ State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Biomedical Pioneering Innovative Center and Beijing Advanced Innovation Center for Genomics, Center for Bioinformatics, Peking University, Beijing, China.
²² Computational Biology Division, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa.
²³ Department of Biology, School of Sciences and Humanities, Nazarbayev University, Astana, Kazakhstan.
²⁴ School of Landscape and Horticulture, Yunnan Agricultural University, Kunming, China.
²⁵ Cancer Research Center, Spanish National Research Council, University of Salamanca & Institute for Biomedical Research of Salamanca, Salamanca, Spain.
²⁶ Beykoz Institute of Life Sciences and Biotechnology, Bezmialem Vakif University, Istanbul, Turkey. asif.khan@udst.edu.qa.
²⁷ APBioNET.org, Singapore, Singapore. asif.khan@udst.edu.qa.
²⁸ Centre for Bioinformatics, School of Data Sciences, Perdana University, Kuala Lumpur, Malaysia. asif.khan@udst.edu.qa.
²⁹ College of Computing and Information Technology, University of Doha for Science and Technology, Doha, Qatar. asif.khan@udst.edu.qa.

^# Contributed equally.

PMID: 37568018
DOI: 10.1038/s41587-023-01891-9

Grand challenges in bioinformatics education and training

Esra Büşra Işık et al. Nat Biotechnol. 2023 Aug.

. 2023 Aug;41(8):1171-1174.

doi: 10.1038/s41587-023-01891-9.

Authors

Affiliations

¹ Beykoz Institute of Life Sciences and Biotechnology, Bezmialem Vakif University, Istanbul, Turkey.
² APBioNET.org, Singapore, Singapore.
³ Ontario Institute for Cancer Research, Toronto, Ontario, Canada.
⁴ Bioinformatics.ca, Toronto, Ontario, Canada.
⁵ Carnegie Mellon University, Pittsburgh, PA, USA.
⁶ School of Computer Science and Engineering, University of New South Wales, Sydney, New South Wales, Australia.
⁷ Swiss Institute of Bioinformatics, Lausanne, Switzerland.
⁸ Dutch Techcentre for Life Sciences, Utrecht, the Netherlands.
⁹ Amrita School of Biotechnology, Amrita Vishwa Vidyapeetham, Clappana, India.
¹⁰ Bioclues.org, Hyderabad, India.
¹¹ Department of Bioinformatics, Hans Raj Mahila Maha Vidyalaya, Jalandhar, India.
¹² European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.
¹³ Genetics Research Centre, Universitas YARSI, Jakarta, Indonesia.
¹⁴ School of Applied Science, Temasek Polytechnic, Singapore, Singapore.
¹⁵ Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.
¹⁶ International Society for Computational Biology, Leesburg, VA, USA.
¹⁷ CSIRO Data61, Brisbane, Queensland, Australia.
¹⁸ Institute of Medical Science, University of Tokyo, Tokyo, Japan.
¹⁹ Department of Biochemistry, YLL School of Medicine, National University of Singapore, Singapore, Singapore.
²⁰ National Supercomputing Centre, Singapore, Singapore.
²¹ State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Biomedical Pioneering Innovative Center and Beijing Advanced Innovation Center for Genomics, Center for Bioinformatics, Peking University, Beijing, China.
²² Computational Biology Division, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa.
²³ Department of Biology, School of Sciences and Humanities, Nazarbayev University, Astana, Kazakhstan.
²⁴ School of Landscape and Horticulture, Yunnan Agricultural University, Kunming, China.
²⁵ Cancer Research Center, Spanish National Research Council, University of Salamanca & Institute for Biomedical Research of Salamanca, Salamanca, Spain.
²⁶ Beykoz Institute of Life Sciences and Biotechnology, Bezmialem Vakif University, Istanbul, Turkey. asif.khan@udst.edu.qa.
²⁷ APBioNET.org, Singapore, Singapore. asif.khan@udst.edu.qa.
²⁸ Centre for Bioinformatics, School of Data Sciences, Perdana University, Kuala Lumpur, Malaysia. asif.khan@udst.edu.qa.
²⁹ College of Computing and Information Technology, University of Doha for Science and Technology, Doha, Qatar. asif.khan@udst.edu.qa.

^# Contributed equally.

PMID: 37568018
DOI: 10.1038/s41587-023-01891-9

No abstract available

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References

1. EMBL-EBI. What is bioinformatics? | Bioinformatics for the terrified. https://www.ebi.ac.uk/training/online/courses/bioinformatics-terrified/w... (accessed 20 February 2023).
1. Attwood, T. K., Blackford, S., Brazas, M. D., Davies, A. & Schneider, M. V. Brief. Bioinform. 20, 398–404 (2019). - DOI - PubMed
1. Roberts, M. et al. Nat. Mach. Intell. 3, 199–217 (2021). - DOI
1. Williams, J. J. et al. PLoS One 14, e0224288 (2019). - DOI - PubMed - PMC
1. Brazas, M. D., Blackford, S. & Attwood, T. K. Nature 544, 161 (2017). - DOI - PubMed

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Grand challenges in bioinformatics education and training

Affiliations

Grand challenges in bioinformatics education and training

Authors

Affiliations

References

MeSH terms

LinkOut - more resources

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