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. 2023 Aug 14;23(1):220.
doi: 10.1186/s12866-023-02964-0.

Mesomycoplasma ovipneumoniae from goats with respiratory infection: pathogenic characteristics, population structure, and genomic features

Affiliations

Mesomycoplasma ovipneumoniae from goats with respiratory infection: pathogenic characteristics, population structure, and genomic features

Chunxia Ma et al. BMC Microbiol. .

Abstract

Background: Mycoplasma ovipneumoniae is a critical pathogen that causes respiratory diseases that threaten Caprini health and cause economic damage. A genome-wide study of M. ovipneumoniae will help understand the pathogenic characteristics of this microorganism.

Results: Toxicological pathology and whole-genome sequencing of nine M. ovipneumoniae strains isolated from goats were performed using an epidemiological survey. These strains exhibited anterior ventral lung consolidation, typical of bronchopneumonia in goats. Average nucleotide identity and phylogenetic analysis based on whole-genome sequences showed that all M. ovipneumoniae strains clustered into two clades, largely in accordance with their geographical origins. The pan-genome of the 23 M. ovipneumoniae strains contained 5,596 genes, including 385 core, 210 soft core, and 5,001 accessory genes. Among these genes, two protein-coding genes were annotated as cilium adhesion and eight as paralog surface adhesins when annotated to VFDB, and no antibiotic resistance-related genes were predicted. Additionally, 23 strains carried glucosidase-related genes (ycjT and group_1595) and glucosidase-related genes (atpD_2), indicating that M. ovipneumoniae possesses a wide range of glycoside hydrolase activities.

Conclusions: The population structure and genomic features identified in this study will facilitate further investigations into the pathogenesis of M. ovipneumoniae and lay the foundation for the development of preventive and therapeutic methods.

Keywords: Mycoplasma ovipneumoniae; Pan-genome; Pathogenesis; Whole-genome sequencing.

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Conflict of interest statement

The authors declare no competing interests.

Figures

Fig. 1
Fig. 1
Morphology of goat lung tissue. A and B represent cell morphology of goat lung tissue after Mycoplasma ovipneumoniae NN-MO infection. C and D represent morphology of goat lung tissue after M. ovipneumoniae BHF6 infection
Fig. 2
Fig. 2
Hierarchical clustering in two dimensions of pairwise average nucleotide identity (ANI) of 23 Mycoplasma ovipneumoniae strains. Pairwise ANI values are presented as a heatmap
Fig. 3
Fig. 3
Phylogenetic analysis based on the pangenome of 23 Mycoplasma ovipneumoniae strains. Emerald and yellow in outer ring represent the Bayesian analysis of population structure (BAPS) cluster to which each strain is attributed
Fig. 4
Fig. 4
A Pie chart showing the distribution of the core genes, soft-core genes, shell genes and cloud genes present in the pangenome of 23 Mycoplasma ovipneumoniae strains. B Pan-genome and conserved genome. Graph representing the total genes (dotted line) and conserved gene (solid line) of the 23 M. ovipneumoniae strains genomes
Fig. 5
Fig. 5
Distribution of carbohydrate-active enzyme genes in 23 Mycoplasma ovipneumoniae strains genomes

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