Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2023 Dec;21(12):771.
doi: 10.1038/s41579-023-00981-4.

Quality MAGnified

Rex R Malmstrom  1
Affiliations
Free article

Quality MAGnified

Rex R Malmstrom. Nat Rev Microbiol. 2023 Dec.
Free article
No abstract available

PubMed Disclaimer

References

    1. Bowers, R. M. et al. Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nat. Biotechnol. 35, 725–731 (2017). - DOI - PubMed - PMC
    1. Parks, D. H. et al. CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes. Genome Res. 25, 1043–1055 (2015). - DOI - PubMed - PMC
    1. Chklovski, A. et al. CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning. Nat. Methods 20, 1203–1212 (2023). - DOI - PubMed
    1. Mattock, J. & Watson, M. A comparison of single-coverage and multi-coverage metagenomic binning reveals extensive hidden contamination. Nat. Methods 20, 1170–1173 (2023). - DOI - PubMed
    1. Bornemann, T. L. V. et al. uBin: a manual refining tool for genomes from metagenomes. Environ. Microbiol. 25, 1077–1083 (2023). - DOI - PubMed