Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2024 Dec;42(12):1804-1805.
doi: 10.1038/s41587-023-02110-1.

KARR-seq maps higher-order RNA structures and RNA-RNA interactions across the transcriptome

No authors listed

KARR-seq maps higher-order RNA structures and RNA-RNA interactions across the transcriptome

No authors listed. Nat Biotechnol. 2024 Dec.
No abstract available

PubMed Disclaimer

References

    1. Mortimer, S. A., Kidwell, M. A. & Doudna, J. A. Insights into RNA structure and function from genome-wide studies. Nat. Rev. Genet. 15, 469–479 (2014). A review that presents the relationship between RNA structures and functions. - DOI - PubMed
    1. Spitale, R. C. & Incarnato, D. Probing the dynamic RNA structurome and its functions. Nat. Rev. Genet. 24, 178–196 (2023). A review that summarizes methods to probe RNA structures and RNA–RNA interactions. - DOI - PubMed
    1. Ganser, L. R., Kelly, M. L., Herschlag, D. & Al-Hashimi, H. M. The roles of structural dynamics in the cellular functions of RNAs. Nat. Rev. Mol. Cell Biol. 20, 474–489 (2019). A review that describes the dynamic nature of RNA structures and explains how structure changes enable RNA functionality. - DOI - PubMed - PMC
    1. Weng, X. et al. Keth-seq for transcriptome-wide RNA structure mapping. Nat. Chem. Biol. 16, 489–492 (2020). This article reports N3-kethoxal for RNA labeling. - DOI - PubMed - PMC
    1. You, Q. et al. Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution. Nat. Biotechnol. 39, 225–235 (2021). This article reports dendrimer-mediated DNA conformation capture. - DOI - PubMed

LinkOut - more resources