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Review
. 2024 Jun;20(6):1213-1246.
doi: 10.1080/15548627.2024.2319901. Epub 2024 Mar 24.

International consensus guidelines for the definition, detection, and interpretation of autophagy-dependent ferroptosis

Xin Chen  1 Andrey S Tsvetkov  2 Han-Ming Shen  3 Ciro Isidoro  4 Nicholas T Ktistakis  5 Andreas Linkermann  6   7 Werner J H Koopman  8   9 Hans-Uwe Simon  10   11 Lorenzo Galluzzi  12   13   14 Shouqing Luo  15 Daqian Xu  16 Wei Gu  17 Olivier Peulen  18 Qian Cai  19 David C Rubinsztein  20   21 Jen-Tsan Chi  22 Donna D Zhang  23 Changfeng Li  24 Shinya Toyokuni  25   26 Jinbao Liu  27 Jong-Lyel Roh  28 Enyong Dai  29 Gabor Juhasz  30   31 Wei Liu  32 Jianhua Zhang  33 Minghua Yang  34   35 Jiao Liu  36 Ling-Qiang Zhu  37 Weiping Zou  38 Mauro Piacentini  39   40 Wen-Xing Ding  41 Zhenyu Yue  42 Yangchun Xie  43 Morten Petersen  44 David A Gewirtz  45 Michael A Mandell  46 Charleen T Chu  47 Debasish Sinha  48 Eftekhar Eftekharpour  49   50 Boris Zhivotovsky  51   52   53 Sébastien Besteiro  54   55 Dmitry I Gabrilovich  56 Do-Hyung Kim  57 Valerian E Kagan  58 Hülya Bayir  59 Guang-Chao Chen  60 Scott Ayton  61 Jan D Lünemann  62 Masaaki Komatsu  63 Stefan Krautwald  64 Ben Loos  65 Eric H Baehrecke  66 Jiayi Wang  67   68   69 Jon D Lane  70 Junichi Sadoshima  71 Wan Seok Yang  72 Minghui Gao  73 Christian Münz  74 Michael Thumm  75 Martin Kampmann  76   77 Di Yu  78   79 Marta M Lipinski  80 Jace W Jones  81 Xuejun Jiang  82 Herbert J Zeh  83 Rui Kang  83 Daniel J Klionsky  84 Guido Kroemer  85   50   55 Daolin Tang  83
Affiliations
Review

International consensus guidelines for the definition, detection, and interpretation of autophagy-dependent ferroptosis

Xin Chen et al. Autophagy. 2024 Jun.

Abstract

Macroautophagy/autophagy is a complex degradation process with a dual role in cell death that is influenced by the cell types that are involved and the stressors they are exposed to. Ferroptosis is an iron-dependent oxidative form of cell death characterized by unrestricted lipid peroxidation in the context of heterogeneous and plastic mechanisms. Recent studies have shed light on the involvement of specific types of autophagy (e.g. ferritinophagy, lipophagy, and clockophagy) in initiating or executing ferroptotic cell death through the selective degradation of anti-injury proteins or organelles. Conversely, other forms of selective autophagy (e.g. reticulophagy and lysophagy) enhance the cellular defense against ferroptotic damage. Dysregulated autophagy-dependent ferroptosis has implications for a diverse range of pathological conditions. This review aims to present an updated definition of autophagy-dependent ferroptosis, discuss influential substrates and receptors, outline experimental methods, and propose guidelines for interpreting the results.Abbreviation: 3-MA:3-methyladenine; 4HNE: 4-hydroxynonenal; ACD: accidentalcell death; ADF: autophagy-dependentferroptosis; ARE: antioxidant response element; BH2:dihydrobiopterin; BH4: tetrahydrobiopterin; BMDMs: bonemarrow-derived macrophages; CMA: chaperone-mediated autophagy; CQ:chloroquine; DAMPs: danger/damage-associated molecular patterns; EMT,epithelial-mesenchymal transition; EPR: electronparamagnetic resonance; ER, endoplasmic reticulum; FRET: Försterresonance energy transfer; GFP: green fluorescent protein;GSH: glutathione;IF: immunofluorescence; IHC: immunohistochemistry; IOP, intraocularpressure; IRI: ischemia-reperfusion injury; LAA: linoleamide alkyne;MDA: malondialdehyde; PGSK: Phen Green™ SK;RCD: regulatedcell death; PUFAs: polyunsaturated fatty acids; RFP: red fluorescentprotein;ROS: reactive oxygen species; TBA: thiobarbituricacid; TBARS: thiobarbituric acid reactive substances; TEM:transmission electron microscopy.

Keywords: Cell death; ferritinophagy; iron; lipid peroxidation; lipophagy; lysosome.

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Conflict of interest statement

L.G. is/has been holding research contracts with Lytix Biopharma, Promontory and Onxeo, has received consulting/advisory honoraria from Boehringer Ingelheim, AstraZeneca, OmniSEQ, Onxeo, The Longevity Labs, Inzen, Imvax, Sotio, Promontory, Noxopharm, EduCom, and the Luke Heller TECPR2 Foundation, and holds Promontory stock options. D.C.R. is a consultant for Aladdin Healthcare Technologies Ltd., Mindrank AI, Nido Biosciences, Drishti Discoveries, Retro Biosciences and PAQ Therapeutics. D.I. G. is an employee and shareholder of AstraZeneca. M. K. serves on the Scientific Advisory Boards of Engine Biosciences, Casma Therapeutics, Cajal Neuroscience, Alector, and Montara Therapeutics, and is an advisor to Modulo Bio and Recursion Therapeutics. X.J. holds inventorship of patents related to autophagy and cell death, and holds equity as well as consults for Exarta Therapeutics and Lime Therapeutics. G.K. has been holding research contracts with Daiichi Sankyo, Eleor, Kaleido, Lytix Pharma, PharmaMar, Osasuna Therapeutics, Samsara Therapeutics, Sanofi, Tollys, and Vascage. G.K. is on the Board of Directors of the Bristol Myers Squibb Foundation France. G.K. is a scientific co-founder of everImmune, Osasuna Therapeutics, Samsara Therapeutics and Therafast Bio. G.K. is in the scientific advisory boards of Hevolution, Institut Servier and Longevity Vision Funds. G.K. is the inventor of patents covering therapeutic targeting of aging, cancer, cystic fibrosis and metabolic disorders. G.K.’wife, Laurence Zitvogel, has held research contracts with Glaxo Smyth Kline, Incyte, Lytix, Kaleido, Innovate Pharma, Daiichi Sankyo, Pilege, Merus, Transgene, 9 m, Tusk and Roche, was on the on the Board of Directors of Transgene, is a cofounder of everImmune, and holds patents covering the treatment of cancer and the therapeutic manipulation of the microbiota. G.K.’s brother, Romano Kroemer, was an employee of Sanofi and now consults for Boehringer-Ingelheim. The other authors declare no conflicts of interest or financial interests. The funders had no role in the writing of the manuscript.

Figures

Figure 1.
Figure 1.
Overview of ferroptosis. The SLC7A11-GSH-GPX4 pathway and GPX4-independent pathways (such as AIFM2, GCH, DHODH, and MGST1) inhibit lipid peroxidation, whereas ACSL4, ALOX, and POR promote peroxidation of PUFA-containing phospholipids (PUFA-PL). Cystine is transported into cells by SLC7A11 and rapidly reduced to cysteine, which is utilized for GSH synthesis. GPX4 inhibits lipid peroxidation, the primary driver of ferroptosis, by converting GSH to GSSG. The transcription factor NFE2L2 serves as a key antioxidant system by upregulating genes involved in both GPX4-dependent and GPX4-independent pathways. Lipid peroxidation generates 4HNE, which can induce membrane damage and release DAMPs. Conversely, the endosomal sorting complex required for transport (ESCRT-III) machinery acts as a protective mechanism that delays membrane damage. TFRC increases intracellular iron levels, thereby promoting lipid peroxidation and ferroptosis.
Figure 2.
Figure 2.
Classification of ferroptosis based on autophagic response. Autophagy-dependent ferroptosis: this process relies on the autophagic machinery to induce ferroptosis. Autophagy-independent ferroptosis: In this case, autophagy occurs alongside ferroptosis but does not directly induce ferroptosis or may even have a protective role in the context of ferroptosis.
Figure 3.
Figure 3.
Ferritinophagy in ferroptosis. Ferritin is a cytosolic protein involved in iron storage, and NCOA4 serves as a receptor for the autophagic degradation of ferritin, a process referred to as ferritinophagy. Conditions and factors such as hypoxia, TRIM7, and HERC2 decrease NCOA4 expression, thereby inhibiting ferritinophagy-dependent ferroptosis. Conversely, PTBP1 and ATM promote NCOA4-mediated ferritinophagy. Additionally, ALDH1A3 can bind to MAP1LC3 to enhance ferritinophagy-dependent ferroptosis.
Figure 4.
Figure 4.
Lipophagy in ferroptosis. Lipophagy refers to the autophagic clearance of lipid droplets, which function as storage organelles for neutral lipids. RAB7A, associated with lipid droplets, drives lipophagy and promotes subsequent ferroptosis. The formation of lipid droplets, mediated by TPD52 and PLTP, antagonizes lipophagy-dependent ferroptosis. In contrast, PGRMC1 triggers lipophagy-dependent ferroptosis. PUFA, polyunsaturated fatty acid.
Figure 5.
Figure 5.
Mitophagy in ferroptosis. Mitophagy is a selective process that involves the autophagic clearance of damaged or dysfunctional mitochondria. The PINK1-PRKN pathway is a well-studied regulatory pathway for mitophagy. In this pathway, PINK1 recruits PRKN, which facilitates the degradation of mitochondria through mitophagy receptors such as FUNDC1. Mitochondrial fission induced by DNM1L/Drp1 can promote mitophagy-dependent ferroptosis. Additionally, the mitochondrial protein FTMT inhibits ROS production and ferroptosis.
Figure 6.
Figure 6.
Clockophagy in ferroptosis. BMAL1/ARNTL, a transcription factor involved in the circadian clock, undergoes selective degradation through autophagy, a process known as clockophagy. The autophagy receptor SQSTM1/p62 plays a role in recognizing and degrading BMAL1 during clockophagy. Degradation of BMAL1 results in the upregulation of EGLN2, a target gene of BMAL1. EGLN2, in turn, inhibits the function of HIF1A, which acts as a suppressor of ferroptosis by inducing the expression of FABP3 and FABP7. These proteins regulate fatty acid uptake and lipid storage, thereby limiting the availability of polyunsaturated fatty acid (PUFA) and influencing the susceptibility to ferroptosis.
Figure 7.
Figure 7.
CMA- or TAX1BP1-mediated GPX4 degradation in ferroptosis. CMA serves as a pathway for GPX4 protein degradation during ferroptosis. LAMP2 plays a key role in transporting GPX4 across the lysosomal membrane, and HSPA8/HSC70 interacts with GPX4 and LAMP2, facilitating CMA. CMA-mediated degradation of GPX4 can be inhibited by CKB-mediated GPX4 phosphorylation. LGMN assists in CMA-mediated GPX4 degradation. Furthermore, macroautophagy/autophagy also contributes to GPX4 degradation during ferroptosis. SMPD1/ASM promotes the autophagic degradation of GPX4, whereas MTOR inhibits GPX4 protein degradation and subsequent ferroptosis. Copper directly binds to GPX4, leading to its autophagic degradation, and, in this process, TAX1BP1 acts as an autophagic receptor.
Figure 8.
Figure 8.
Autophagy-dependent ferroptosis in diseases. Autophagy-dependent ferroptosis plays a role in various diseases, encompassing both cancer and non-cancerous conditions.
Figure 9.
Figure 9.
Reaction between MDA and TBA to form the MDA-TBA adduct.
Figure 10.
Figure 10.
Fluorescent probe-based assays for monitoring lipid peroxidation. (A) BODIPY − 581/591-C11 assay; (B) click-iT LAA assay; (C) LiperFluo assay.
Figure 11.
Figure 11.
Assessing Fe2+ with the FerroOrange assay.
Figure 12.
Figure 12.
Assessing Fe2+ with the phen green SK assay.

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References

    1. Galluzzi L, Vitale I, Aaronson SA, et al. Molecular mechanisms of cell death: recommendations of the nomenclature committee on cell death 2018. Cell Death Differ. 2018;25(3):486–541. doi: 10.1038/s41418-017-0012-4 - DOI - PMC - PubMed
    1. Vitale I, Pietrocola F, Guilbaud E, et al. Apoptotic cell death in disease—Current understanding of the NCCD 2023. Cell Death Differ. 2023;30(5):1097–1154. doi: 10.1038/s41418-023-01153-w - DOI - PMC - PubMed
    1. Cookson BT, Brennan MA.. Pro-inflammatory programmed cell death. Trends Microbiol. 2001;9(3):113–114. doi: 10.1016/S0966-842X(00)01936-3 - DOI - PubMed
    1. Degterev A, Huang Z, Boyce M, et al. Chemical inhibitor of nonapoptotic cell death with therapeutic potential for ischemic brain injury. Nat Chem Biol. 2005;1(2):112–119. doi: 10.1038/nchembio711 - DOI - PubMed
    1. Dixon SJ, Lemberg KM, Lamprecht MR, et al. Ferroptosis: an iron-dependent form of nonapoptotic cell death. Cell. 2012;149(5):1060–1072. doi: 10.1016/j.cell.2012.03.042 - DOI - PMC - PubMed

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