METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification

Erin S Baker¹, Winnie Uritboonthai², Aries Aisporna², Corey Hoang², Heino M Heyman^{3

4}, Lisa Connell⁵, Damien Olivier-Jimenez^{6

7}, Martin Giera^{6

7}, Gary Siuzdak^{8

9}

Affiliations

¹ Department of Chemistry, The University of North Carolina at Chapel Hill, Chapel Hill, NC, USA. erinmsb@unc.edu.
² Scripps Center of Metabolomics and Mass Spectrometry, La Jolla, CA, USA.
³ Bruker Daltonics, Bruker Scientific LLC, Billerica, MA, USA.
⁴ Metabolon Inc., 617 Davis Drive. Suite 100, Morrisville, NC, USA.
⁵ Avanti Polar Lipids (part of Croda International), Alabaster, AL, USA.
⁶ Leiden University Medical Center, Center for Proteomics and Metabolomics, Leiden, The Netherlands.
⁷ The Novo Nordisk Foundation Center for Stem Cell Medicine (reNEW), Leiden University Medical Center, Leiden, The Netherlands.
⁸ Scripps Center of Metabolomics and Mass Spectrometry, La Jolla, CA, USA. siuzdak@scripps.edu.
⁹ Department of Chemistry, Molecular and Computational Biology Scripps Research Institute, La Jolla, CA, USA. siuzdak@scripps.edu.

PMID: 38802544
PMCID: PMC11218851
DOI: 10.1038/s42255-024-01058-z

METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification

Erin S Baker et al. Nat Metab. 2024 Jun.

. 2024 Jun;6(6):981-982.

doi: 10.1038/s42255-024-01058-z.

Authors

Erin S Baker¹, Winnie Uritboonthai², Aries Aisporna², Corey Hoang², Heino M Heyman^{3

4}, Lisa Connell⁵, Damien Olivier-Jimenez^{6

7}, Martin Giera^{6

7}, Gary Siuzdak^{8

9}

Affiliations

¹ Department of Chemistry, The University of North Carolina at Chapel Hill, Chapel Hill, NC, USA. erinmsb@unc.edu.
² Scripps Center of Metabolomics and Mass Spectrometry, La Jolla, CA, USA.
³ Bruker Daltonics, Bruker Scientific LLC, Billerica, MA, USA.
⁴ Metabolon Inc., 617 Davis Drive. Suite 100, Morrisville, NC, USA.
⁵ Avanti Polar Lipids (part of Croda International), Alabaster, AL, USA.
⁶ Leiden University Medical Center, Center for Proteomics and Metabolomics, Leiden, The Netherlands.
⁷ The Novo Nordisk Foundation Center for Stem Cell Medicine (reNEW), Leiden University Medical Center, Leiden, The Netherlands.
⁸ Scripps Center of Metabolomics and Mass Spectrometry, La Jolla, CA, USA. siuzdak@scripps.edu.
⁹ Department of Chemistry, Molecular and Computational Biology Scripps Research Institute, La Jolla, CA, USA. siuzdak@scripps.edu.

PMID: 38802544
PMCID: PMC11218851
DOI: 10.1038/s42255-024-01058-z

Erratum in

Publisher Correction: METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification.
Baker ES, Uritboonthai W, Aisporna A, Hoang C, Heyman HM, Connell L, Olivier-Jimenez D, Giera M, Siuzdak G. Baker ES, et al. Nat Metab. 2024 Jul;6(7):1418. doi: 10.1038/s42255-024-01075-y. Nat Metab. 2024. PMID: 38849561 No abstract available.

No abstract available

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Conflict of interest statement

Competing interests

The authors declare no competing interests.

Figures

**Fig. 1 |. METLIN-CCS Lipid Database.**
a, All lipid ions contained in the METLIN-CCS Lipid Extension. b, only the phosphatidylglycerol (PG) class and its different ion types observed. c, a subset of lipid classes illustrating their *m/z* versus CCS differences in their preferred ionization mode of either [M+H]⁺ (circles) or [M−H]⁻ (squares). d, selected protonated PE and PC ions from *m/z* 700–800 showing several CCS isomer separations and how PC CCS values have a significant offset when compared to PE lipids.

See this image and copyright information in PMC

References

1. Tsugawa H et al. Nat. Biotechnol 38, 1159–1163 (2020). - PubMed
1. Hinz C et al. Anal. Chem 91, 8025–8035 (2019). - PMC - PubMed
1. Leaptrot KL, May JC, Dodds JN & McLean JA Nat. Commun 10, 985 (2019). - PMC - PubMed
1. Kirkwood KI et al. J. Proteome Res 21, 232–242 (2022). - PMC - PubMed
1. Baker ES et al. Nat. Methods 20, 1836–1837 (2023). - PMC - PubMed

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METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification

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METLIN-CCS Lipid Database: An authentic standards resource for lipid classification and identification

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