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. 1985 Sep;1(3):149-51.
doi: 10.1093/bioinformatics/1.3.149.

A microcomputer program for the identification of tRNA genes

G Paolella  1 , T Russo
Affiliations

A microcomputer program for the identification of tRNA genes

G Paolella et al. Comput Appl Biosci. 1985 Sep.

Abstract

A microcomputer program which locates tRNA genes within long DNA sequences is described. The search is performed either by identifying tRNA-like secondary structures or by locating eukaryotic RNA polymerase III promoter consensus sequences. The program is also useful in finding inverted repeats allowing the formation of stem-loop secondary structures in tRNA. The program has been developed in BASIC and 6502 Assembler and runs on the Apple II plus and IIe microcomputers. The execution is quite fast; all the operations are carried out in 1-90 s, depending on the required task and on the sequence length.

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