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[Preprint]. 2024 Nov 6:2024.06.26.24309127.
doi: 10.1101/2024.06.26.24309127.

Stratifying Lung Adenocarcinoma Risk with Multi-ancestry Polygenic Risk Scores in East Asian Never-Smokers

Batel BlechterXiaoyu WangJianxin ShiKouya ShiraishiJiyeon ChoiKeitaro MatsuoTzu-Yu ChenJuncheng DaiRayjean J HungKexin ChenXiao-Ou ShuYoung Tae KimParichoy Pal ChoudhuryJacob WilliamsMaria Teresa LandiDongxin LinWei ZhengZhihua YinBaosen ZhouJiucun WangWei Jie SeowLei SongI-Shou ChangWei HuLi-Hsin ChienQiuyin CaiYun-Chul HongHee Nam KimYi-Long WuMaria Pik WongBrian Douglas RichardsonShilan LiTongwu ZhangCharles BreezeZhaoming WangBryan A BassigJin Hee KimDemetrius AlbanesJason Yy WongMin-Ho ShinLap Ping ChungYang YangShe-Juan AnHong ZhengYasushi YatabeXu-Chao ZhangYoung-Chul KimNeil E CaporasoJiang ChangJames Chung Man HoMichiaki KuboYataro DaigoMinsun SongYukihide MomozawaYoichiro KamataniMasashi KobayashiKenichi OkuboTakayuki HondaH Dean HosgoodHideo KunitohShun-Ichi WatanabeYohei MiyagiHaruhiko NakayamaShingo MatsumotoHidehito HorinouchiMasahiro TsuboiRyuji HamamotoKoichi GotoYuichiro OheAtsushi TakahashiAkiteru GotoYoshihiro MinamiyaMegumi HaraYuichiro NishidaKenji TakeuchiKenji WakaiKoichi MatsudaYoshinori MurakamiKimihiro ShimizuHiroyuki SuzukiMotonobu SaitoYoichi OhtakiKazumi TanakaTangchun WuFusheng WeiHongji DaiMitchell J MachielaJian SuYeul Hong KimIn-Jae OhVictor Ho Fun LeeGee-Chen ChangYing-Huang TsaiKuan-Yu CheMing-Shyan HuangWu-Chou SuYuh-Min ChenAdeline SeowJae Yong ParkSun-Seog KweonKun-Chieh ChenYu-Tang GaoBiyun QianChen WuDaru LuJianjun LiuAnn G SchwartzRichard HoulstonMargaret R SpitzIvan P GorlovXifeng WuPing YangStephen LamAdonina TardonChu ChenStig E BojesenMattias JohanssonAngela RischHeike BickeböllerBu-Tian JiH-Erich WichmannDavid C ChristianiGadi RennertSusanne ArnoldPaul BrennanJames McKayJohn K FieldMichael P A DaviesSanjay S SheteLoic Le MarchandGeoffrey LiuAngeline AndrewLambertus A KiemeneyShan Zienolddiny-NaruiKjell GrankvistMikael JohanssonAngela CoxFiona TaylorJian-Min YuanPhilip LazarusMatthew B SchabathMelinda C AldrichHyo-Sung JeonShih Sheng JiangJae Sook SungChung-Hsing ChenChin-Fu HsiaoYoo Jin JungHuan GuoZhibin HuLaurie BurdettMeredith YeagerAmy HutchinsonBelynda HicksJia LiuBin ZhuSonja I BerndtWei WuJunwen WangYuqing LiJin Eun ChoiKyong Hwa ParkSook Whan SungLi LiuChang Hyun KangWen-Chang WangJun XuPeng GuanWen TanChong-Jen YuGong YangAlan Dart Loon SihoeYing ChenYi Young ChoiJun Suk KimHo-Il YoonIn Kyu ParkPing XuQincheng HeChih-Liang WangHsiao-Han HungRoel C H VermeulenIona ChengJunjie WuWei-Yen LimFang-Yu TsaiJohn K C ChanJihua LiHongyan ChenHsien-Chih LinLi JinJie LiuNorie SawadaTaiki YamajiKathleen WyattShengchao A LiHongxia MaMeng ZhuZhehai WangSensen ChengXuelian LiYangwu RenAnn ChaoMotoki IwasakiJunjie ZhuGening JiangKe FeiGuoping WuChih-Yi ChenChien-Jen ChenPan-Chyr YangJinming YuVictoria L StevensJoseph F FraumeniNilanjan ChatterjeeOlga Y GorlovaChristopher I AmosHongbing ShenChao Agnes HsiungStephen J ChanockNathaniel RothmanTakashi KohnoQing LanHaoyu Zhang

Stratifying Lung Adenocarcinoma Risk with Multi-ancestry Polygenic Risk Scores in East Asian Never-Smokers

Batel Blechter et al. medRxiv. .

Abstract

Polygenic risk scores (PRSs) are promising for risk stratification but have mainly been developed in European populations. This study developed single- and multi-ancestry PRSs for lung adenocarcinoma (LUAD) in East Asian (EAS) never-smokers using genome-wide association study summary statistics from EAS (8,002 cases; 20,782 controls) and European (2,058 cases; 5,575 controls) populations. A multi-ancestry PRS, developed using CT-SLEB, was strongly associated with LUAD risk (odds ratio=1.71, 95% confidence interval (CI):1.61,1.82), with an area under the receiver operating curve value of 0.640 (95% CI:0.629,0.653). Individuals in the highest 20% of the PRS had nearly four times the risk compared to the lowest 20%. Individuals in the 95 th percentile of the PRS had an estimated 6.69% lifetime absolute risk. Notably, this group reached the average population 10-year LUAD risk at age 50 (0.42%) by age 41. Our study underscores the potential of multi-ancestry PRS approaches to enhance LUAD risk stratification in EAS never-smokers.

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