Evolutionary cues of gene fusion and fission in plants

Chuanjing An^#^{1

2}, Mengyuan Zhang^#³, Yanru Song^#⁴, Zhengwen Yan^{1

2}, Ling Zhou^{1

2}, Yuefang Gao⁵, Jisheng Li^{6

7}

Affiliations

¹ Institute of Sericulture, Chengde Medical University, Chengde, 067000, Hebei, China.
² Department of Biological Science and Technology, Chengde Medical University, Chengde, 067000, Hebei, China.
³ College of Horticulture, Northwest A&F University, Yangling, China.
⁴ College of Veterinary Medicine, China Agriculture University, Beijing, 100193, China.
⁵ College of Horticulture, Northwest A&F University, Yangling, China. yuefanggao@nwafu.edu.cn.
⁶ Institute of Sericulture, Chengde Medical University, Chengde, 067000, Hebei, China. jshlee@cdmc.edu.cn.
⁷ Department of Biological Science and Technology, Chengde Medical University, Chengde, 067000, Hebei, China. jshlee@cdmc.edu.cn.

^# Contributed equally.

PMID: 39342028
DOI: 10.1007/s00299-024-03331-7

Evolutionary cues of gene fusion and fission in plants

Chuanjing An et al. Plant Cell Rep. 2024.

. 2024 Sep 28;43(10):245.

doi: 10.1007/s00299-024-03331-7.

Authors

Chuanjing An^#^{1

2}, Mengyuan Zhang^#³, Yanru Song^#⁴, Zhengwen Yan^{1

2}, Ling Zhou^{1

2}, Yuefang Gao⁵, Jisheng Li^{6

7}

Affiliations

¹ Institute of Sericulture, Chengde Medical University, Chengde, 067000, Hebei, China.
² Department of Biological Science and Technology, Chengde Medical University, Chengde, 067000, Hebei, China.
³ College of Horticulture, Northwest A&F University, Yangling, China.
⁴ College of Veterinary Medicine, China Agriculture University, Beijing, 100193, China.
⁵ College of Horticulture, Northwest A&F University, Yangling, China. yuefanggao@nwafu.edu.cn.
⁶ Institute of Sericulture, Chengde Medical University, Chengde, 067000, Hebei, China. jshlee@cdmc.edu.cn.
⁷ Department of Biological Science and Technology, Chengde Medical University, Chengde, 067000, Hebei, China. jshlee@cdmc.edu.cn.

^# Contributed equally.

PMID: 39342028
DOI: 10.1007/s00299-024-03331-7

Abstract

Here, we systematically analyzed the potential fusion and fission events of neighboring genes in Arabidopsis genome and analyzed the influence on the protein targeting.

Keywords: Gene fusion and fission; Protein targeting; Signal peptide.

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References

1. An C, Gao Y, Li J, Liu X, Gao F, Gao H (2017) Alternative splicing affects the targeting sequence of peroxisome proteins in Arabidopsis. Plant Cell Rep 36(7):1027–1036 - DOI
1. Badrinarayanan A, Le TBK, Laub MT (2015) Bacterial chromosome organization and segregation. Annu Rev Cell Dev Biol 31:171–199 - DOI
1. Jividen K, Li H (2014) Chimeric RNAs generated by intergenic splicing in normal and cancer cells. Genes Chromosomes Cancer 53(12):963–971 - DOI
1. Lai J, An J, Seim I, Walpole C, Hoffman A, Moya L, Srinivasan S, Perry-Keene JL, Wang C, Lehman ML, Nelson CC, Clements JA, Batra J, Australian Prostate Cancer Bioresource (2016) Fusion transcript loci share many genomic features with non-fusion loci. BMC Genomics 16:1021 - DOI
1. Lee S, Hu Y, Loo SK, Tan Y, Bhargava R, Lewis MT, Wang XS (2020) Landscape analysis of adjacent gene rearrangements reveals BCL2L14-ETV6 gene fusions in more aggressive triple-negative breast cancer. Proc Natl Acad Sci U S A 117(18):9912–9921 - DOI

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Evolutionary cues of gene fusion and fission in plants

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Evolutionary cues of gene fusion and fission in plants

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