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In a recent publication in Cell, Xie et al.1 report a sensitive and scalable method for the detection and characterization of native glycoRNAs and identify acp3U, an abundant modified nucleoside discovered 50 years ago in tRNAPhe, as one of the primary attachment sites for N-glycans.
Declaration of interests The authors declare no competing interests.
Figures
Figure 1.. Deciphering the molecular structure of…
Figure 1.. Deciphering the molecular structure of glycoRNA
Cartoon representation of a generic sialicglycoRNA (left).…
Figure 1.. Deciphering the molecular structure of glycoRNA
Cartoon representation of a generic sialicglycoRNA (left). An
amino-acid-containing nucleoside, acp3U, a verified N-glycan
anchoring nucleoside, is shown next to other carboxylic-acid- and
carboxamide-containing nucleosides, which may also serve as attachment sites for
oligosaccharides (right).
Xie Y, Chai P, Till NA, Hemberger H, Lebedenko CG, Porat J, Watkins CP, Caldwell RM, George BM, Perr J, Bertozzi CR, Garcia BA, Flynn RA.Xie Y, et al.Cell. 2024 Sep 19;187(19):5228-5237.e12. doi: 10.1016/j.cell.2024.07.044. Epub 2024 Aug 21.Cell. 2024.PMID: 39173631Free PMC article.
References
Xie Y, Chai P, Till NA, Hemberger H, Lebedenko CG, Porat J, Watkins CP, Caldwell RM, George BM, Perr J, et al. (2024). The modified RNA base acp3U is an attachment site for N-glycans in glycoRNA. Cell 187, 5228–5237.e7. 10.1016/j.cell.2024.07.044.
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Flynn RA, Pedram K, Malaker SA, Batista PJ, Smith BAH, Johnson AG, George BM, Majzoub K, Villalta PW, Carette JE, and Bertozzi CR (2021). Small RNAs are modified with N-glycans and displayed on the surface of living cells. Cell 184, 3109–3124.e22. 10.1016/j.cell.2021.04.023.
-
DOI
-
PMC
-
PubMed
Kasai H, Nakanishi K, Macfarlane RD, Torgerson DF, Ohashi Z, McCloskey JA, Gross HJ, and Nishimura S (1976). Letter: The structure of Q* nucleoside isolated from rabbit liver transfer ribonucleic acid. J. Am. Chem. Soc 98, 5044–5046. 10.1021/ja00432a071.
-
DOI
-
PubMed
Zhang H, Li XJ, Martin DB, and Aebersold R (2003). Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry. Nat. Biotechnol 21, 660–666. 10.1038/nbt827.
-
DOI
-
PubMed
. Xie Y, De Luna Vitorino FN, Chen Y, Lempiäinen JK, Zhao C, Steinbock RT, Lin Z, Liu X, Zahn E, Garcia AL, et al. (2023). SWAMNA: a comprehensive platform for analysis of nucleic acid modifications. Chem. Commun 59, 12499–12502. 10.1039/d3cc04402e.
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DOI
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PMC
-
PubMed