Closing the genome of Teredinibacter turnerae T7902 by long-read nanopore sequencing
- PMID: 39655922
- PMCID: PMC11737186
- DOI: 10.1128/mra.00484-24
Closing the genome of Teredinibacter turnerae T7902 by long-read nanopore sequencing
Abstract
We present the complete closed circular genome sequence derived from the Oxford Nanopore sequencing of the shipworm endosymbiont, Teredinibacter turnerae T7902 (DSM 15152, ATCC 39867), originally isolated from the shipworm, Lyrodus pedicellatus (1). This sequence will aid in the comparative genomics of shipworm endosymbionts and the understanding of the host-symbiont evolution.
Keywords: endosymbionts; intracellular bacteria; shipworm; symbiosis.
Conflict of interest statement
The authors declare no conflict of interest.
Figures

Update of
-
Closing the genome of Teredinibacter turnerae T7902 by long-read nanopore sequencing.bioRxiv [Preprint]. 2024 Jul 30:2024.07.30.605897. doi: 10.1101/2024.07.30.605897. bioRxiv. 2024. Update in: Microbiol Resour Announc. 2025 Jan 16;14(1):e0048424. doi: 10.1128/mra.00484-24. PMID: 39131338 Free PMC article. Updated. Preprint.
Similar articles
-
Closing the genome of Teredinibacter turnerae T7902 by long-read nanopore sequencing.bioRxiv [Preprint]. 2024 Jul 30:2024.07.30.605897. doi: 10.1101/2024.07.30.605897. bioRxiv. 2024. Update in: Microbiol Resour Announc. 2025 Jan 16;14(1):e0048424. doi: 10.1128/mra.00484-24. PMID: 39131338 Free PMC article. Updated. Preprint.
-
Complete genome sequences of two shipworm endosymbiont strains, Teredinibacter turnerae SR01903 and SR02026.Microbiol Resour Announc. 2025 Jun 12;14(6):e0026525. doi: 10.1128/mra.00265-25. Epub 2025 May 20. Microbiol Resour Announc. 2025. PMID: 40391904 Free PMC article.
-
Complete genome sequences of two new strains of the shipworm endosymbiont, Teredinibacter turnerae.bioRxiv [Preprint]. 2024 Aug 16:2024.08.13.607755. doi: 10.1101/2024.08.13.607755. bioRxiv. 2024. Update in: Microbiol Resour Announc. 2025 Jun 12;14(6):e0026525. doi: 10.1128/mra.00265-25. PMID: 39185227 Free PMC article. Updated. Preprint.
-
Inhibition of Biofilm Formation by Modified Oxylipins from the Shipworm Symbiont Teredinibacter turnerae.Mar Drugs. 2020 Dec 20;18(12):656. doi: 10.3390/md18120656. Mar Drugs. 2020. PMID: 33419303 Free PMC article.
-
Signatures of host/symbiont genome coevolution in insect nutritional endosymbioses.Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10255-61. doi: 10.1073/pnas.1423305112. Epub 2015 May 26. Proc Natl Acad Sci U S A. 2015. PMID: 26039986 Free PMC article. Review.
References
-
- Distel DL, Morrill W, MacLaren-Toussaint N, Franks D, Waterbury J. 2002. Teredinibacter turnerae gen. nov., sp. nov., a dinitrogen-fixing, cellulolytic, endosymbiotic gamma-proteobacterium isolated from the gills of wood-boring molluscs (Bivalvia: Teredinidae). Int J Syst Evol Microbiol 52:2261–2269. doi:10.1099/00207713-52-6-2261 - DOI - PubMed
-
- Altamia MA, Shipway JR, Stein D, Betcher MA, Fung JM, Jospin G, Eisen J, Haygood MG, Distel DL. 2020. Teredinibacter waterburyi sp. nov., a marine, cellulolytic endosymbiotic bacterium isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended description of the genus Teredinibacter. Int J Syst Evol Microbiol 70:2388–2394. doi:10.1099/ijsem.0.004049 - DOI - PMC - PubMed
-
- Altamia MA, Shipway JR, Stein D, Betcher MA, Fung JM, Jospin G, Eisen J, Haygood MG, Distel DL. 2021. Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended description of the genus Teredinibacter. Int J Syst Evol Microbiol 71:004627. doi:10.1099/ijsem.0.004627 - DOI - PMC - PubMed
-
- Yang JC, Madupu R, Durkin AS, Ekborg NA, Pedamallu CS, Hostetler JB, Radune D, Toms BS, Henrissat B, Coutinho PM, et al. . 2009. The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms). PLoS ONE 4:e6085. doi:10.1371/journal.pone.0006085 - DOI - PMC - PubMed
-
- Altamia MA, Lin Z, Trindade-Silva AE, Uy ID, Shipway JR, Wilke DV, Concepcion GP, Distel DL, Schmidt EW, Haygood MG. 2020. Secondary metabolism in the gill microbiota of shipworms (Teredinidae) as revealed by comparison of metagenomes and nearly complete symbiont genomes. mSystems 5:e00261-20. doi:10.1128/mSystems.00261-20 - DOI - PMC - PubMed
Grants and funding
LinkOut - more resources
Full Text Sources
Molecular Biology Databases