Understanding the genomic basis to empower sweet potato breeding
- PMID: 39681630
- DOI: 10.1038/s41477-024-01884-9
Understanding the genomic basis to empower sweet potato breeding
Comment on
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Refining polyploid breeding in sweet potato through allele dosage enhancement.Nat Plants. 2025 Jan;11(1):36-48. doi: 10.1038/s41477-024-01873-y. Epub 2024 Dec 12. Nat Plants. 2025. PMID: 39668213
References
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- Rosyara, U. R., De Jong, W. S., Douches, D. S. & Endelman, J. B. Software for genome-wide association studies in autopolyploids and its application to potato. Plant Genome 9, plantgenome2015.08.0073 (2016) This paper describes the software for GWAS analysis in autopolyploid species
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- Anglin, N. L. et al. Genetic identity, diversity, and population structure of CIP's sweetpotato (I. batatas) germplasm collection. Front. Plant Sci. 12, 660012 (2021). This paper reports the ancestral populations within the sweet potato germplasm collection in the International Potato Center (CIP). - DOI - PubMed - PMC
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- Wu, S. et al. Phased chromosome-level genome assembly provides insight into the origin of hexaploid sweetpotato. Preprint at bioRxiv https://doi.org/10.1101/2024.08.17.608395 (2024) This preprint presents a phased genome assembly of hexaploid sweet potato and provides evidence for its segmental polyploid nature.
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- Dufresne, F., Stift, M., Vergilino, R. & Mable, B. K. Recent progress and challenges in population genetics of polyploid organisms: an overview of current state-of-the-art molecular and statistical tools. Mol. Ecol. 23, 40–69 (2014). A review that summarizes the challenges and methods in population genetics of polyploid species. - DOI - PubMed
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