Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2024:105:247-297.
doi: 10.1007/978-3-031-65187-8_7.

Integrative Approaches to Study Virus Structures

Affiliations
Review

Integrative Approaches to Study Virus Structures

David I Stuart et al. Subcell Biochem. 2024.

Abstract

A virus particle must work as a strongroom to protect its genome, but at the same time it must undergo dramatic conformational changes to infect the cell in order to replicate and assemble progeny. Thus, viruses are miniaturized wonders whose structural complexity requires investigation by a combination of different techniques that can tackle both static and dynamic processes. In this chapter, we will illustrate how major structural techniques such as X-ray crystallography and electron microscopy can be combined with other techniques to determine the structure of complex viruses. The power of these hybrid approaches is discussed through a number of examples.

Keywords: Bacteriophage; Capsid; Cryogenic electron microscopy; Cryogenic electron tomography; Crystal structure; Dissociation; Electron microscopy; Electron tomography; Fitting; Hybrid methods; Mutagenesis; Small-angle X-ray scattering; Virus; X-ray crystallography.

PubMed Disclaimer

References

    1. Buckminster Fuller R, Marks R (1973) The Dymaxion world of Buckminster Fuller. Doubleday
    1. Harrison SC, Olson AJ, Schutt CE, Winkler FK, Bricogne G (1978) Tomato bushy stunt virus at 2.9 Å resolution. Nature 276:368–373 - PubMed - DOI
    1. Abad-Zapatero C, Abdel-Meguid SS, Johnson JE, Leslie AGW, Rayment I, Rossmann MG et al (1980) Structure of Southern bean mosaic virus at 2.8 Å resolution. Nature 286:33–39 - PubMed - DOI
    1. Scheres SH (2012) RELION: implementation of a Bayesian approach to cryo-EM structure determination. J Struct Biol 180:519–530 - PubMed - PMC - DOI
    1. McMullan G, Faruqi AR, Henderson R (2016) Direct electron detectors. Methods Enzymol 579:1–17 - PubMed - DOI
Further Reading
    1. https://www.nobelprize.org/prizes/chemistry/2017/dubochet/lecture/
    1. https://www.nobelprize.org/prizes/chemistry/2017/frank/lecture/
    1. https://www.nobelprize.org/prizes/chemistry/2017/henderson/lecture/
    1. Henderson R, Sali A, Baker ML, Carragher B, Devkota B, Downing KH, Egelman EH, Feng Z, Frank J, Grigorieff N, Jiang W, Ludtke SJ, Medalia O, Penczek PA, Rosenthal PB, Rossmann MG, Schmid MF, Schröder GF, Steven AC, Stokes DL, Westbrook JD, Wriggers W, Yang H, Young J, Berman HM, Chiu W, Kleywegt GJ, Lawson CL (2012) Outcome of the first electron microscopy validation task force meeting. Structure 20:205–214 - PubMed - DOI
    1. Perutz MF, Rossmann MG, Cullis AF, Muirhead H, Will G, North AC (1960) Structure of haemoglobin: a three-dimensional Fourier synthesis at 5.5-a. resolution, obtained by X-ray analysis. Nature 185:416–422 - PubMed - DOI

LinkOut - more resources